RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 TTI2Q6NXR4 508 aa23.82■■□□□ 1.4
TRIM65-202ENST00000540128 PRSS55Q6UWB4 352 aaPredicted RBP23.82■■□□□ 1.4
TRIM65-202ENST00000540128 RBM43Q6ZSC3 357 aaKnown RBP23.82■■□□□ 1.4
TRIM65-202ENST00000540128 INTS8Q75QN2 995 aaKnown RBP23.82■■□□□ 1.4
TRIM65-202ENST00000540128 TRAPPC11Q7Z392 1133 aa23.82■■□□□ 1.4
TRIM65-202ENST00000540128 CLSTN3Q9BQT9 956 aa23.82■■□□□ 1.4
TRIM65-202ENST00000540128 CLDND1Q9NY35 253 aa23.82■■□□□ 1.4
TRIM65-202ENST00000540128 AGAP1Q9UPQ3 857 aa23.82■■□□□ 1.4
TRIM65-202ENST00000540128 LRRIQ3A6PVS8 624 aaPredicted RBP23.81■■□□□ 1.4
TRIM65-202ENST00000540128 OAZ2O95190 189 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 ITGB3P05106 788 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 TYMPP19971 482 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 KLRC2P26717 231 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 POLR2BP30876 1174 aaKnown RBP23.81■■□□□ 1.4
TRIM65-202ENST00000540128 NDUFV1P49821 464 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 VARS2Q5ST30 1063 aaKnown RBP23.81■■□□□ 1.4
TRIM65-202ENST00000540128 FAM186BQ8IYM0 893 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 MLKLQ8NB16 471 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 NELFBQ8WX92 580 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 SENP8Q96LD8 212 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 ZNF560Q96MR9 790 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 CLEC1BQ9P126 229 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 THEGQ9P2T0 379 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 HCFC2Q9Y5Z7 792 aa23.81■■□□□ 1.4
TRIM65-202ENST00000540128 COL6A3P12111 3177 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 BICDL2A1A5D9 508 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 TRIM49BA6NDI0 452 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 TULP1O00294 542 aaPredicted RBP23.8■■□□□ 1.4
TRIM65-202ENST00000540128 CLCN4P51793 760 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 DLX2Q07687 328 aaPredicted RBP23.8■■□□□ 1.4
TRIM65-202ENST00000540128 C1orf220Q5T0J3 134 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 KLHL10Q6JEL2 608 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 LILRA6Q6PI73 481 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 DSTYKQ6XUX3 929 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 USP37Q86T82 979 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 ATXN2LQ8WWM7 1075 aaKnown RBP23.8■■□□□ 1.4
TRIM65-202ENST00000540128 MSLNLQ96KJ4 702 aa23.8■■□□□ 1.4
TRIM65-202ENST00000540128 DUSP9Q99956 384 aaKnown RBP23.8■■□□□ 1.4
TRIM65-202ENST00000540128 ARHGEF37A1IGU5 675 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 KPNA7A9QM74 516 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 H7C4K7 107 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 SLC16A3O15427 465 aaKnown RBP23.79■■□□□ 1.4
TRIM65-202ENST00000540128 TBX10O75333 385 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 C4BPAP04003 597 aaKnown RBP23.79■■□□□ 1.4
TRIM65-202ENST00000540128 CYP11A1P05108 521 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 RPL17P18621 184 aaKnown RBP23.79■■□□□ 1.4
TRIM65-202ENST00000540128 VAMP7P51809 220 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 DLG4P78352 724 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 RBM10P98175 930 aaKnown RBP23.79■■□□□ 1.4
TRIM65-202ENST00000540128 PAK1Q13153 545 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 LEXMQ3ZCV2 418 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 SV2CQ496J9 727 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 CASP10Q92851 521 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 CEP63Q96MT8 703 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 GDAP2Q9NXN4 497 aa23.79■■□□□ 1.4
TRIM65-202ENST00000540128 CST3P01034 146 aaPredicted RBP23.78■■□□□ 1.4
TRIM65-202ENST00000540128 SRGAP2BP0DMP2 458 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 KCNA5P22460 613 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 RAB33AQ14088 237 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 SLC8B1Q6J4K2 584 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 RSPO2Q6UXX9 243 aaPredicted RBP23.78■■□□□ 1.4
TRIM65-202ENST00000540128 C15orf39Q6ZRI6 1047 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 FILIP1Q7Z7B0 1213 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 EEF2KMTQ96G04 330 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 OXCT2Q9BYC2 517 aaPredicted RBP23.78■■□□□ 1.4
TRIM65-202ENST00000540128 DSEQ9UL01 958 aa23.78■■□□□ 1.4
TRIM65-202ENST00000540128 ADAM12O43184 909 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 KRT19P08727 400 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 EPB41P11171 864 aaKnown RBP23.77■■□□□ 1.4
TRIM65-202ENST00000540128 ODC1P11926 461 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 KRT13P13646 458 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 HOXB8P17481 243 aaPredicted RBP23.77■■□□□ 1.4
TRIM65-202ENST00000540128 NLRP12P59046 1061 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 BFSP1Q12934 665 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 AAK1Q2M2I8 961 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 ZACNQ401N2 412 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 ANKRD54Q6NXT1 300 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 LIMS2Q7Z4I7 341 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 HDAC7Q8WUI4 952 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 HPDLQ96IR7 371 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 RWDD2AQ9UIY3 292 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 FBXL5Q9UKA1 691 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 CTNND2Q9UQB3 1225 aa23.77■■□□□ 1.4
TRIM65-202ENST00000540128 CYB561D2O14569 222 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 STAU1O95793 577 aaKnown RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 GLUD1P00367 558 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 EPCAMP16422 314 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 GTF2H1P32780 548 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 MRPS5P82675 430 aaKnown RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 TFF2Q03403 129 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 YWHAHQ04917 246 aaPredicted RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 MYO1EQ12965 1108 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 TDRD10Q5VZ19 366 aaKnown RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 LLGL2Q6P1M3 1020 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 SYCE2Q6PIF2 218 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 EP400NLQ6ZTU2 488 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 DZANK1Q9NVP4 752 aa23.76■■□□□ 1.39
TRIM65-202ENST00000540128 BARX2Q9UMQ3 279 aaPredicted RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 R3HCC1Q9Y3T6 440 aaKnown RBP23.76■■□□□ 1.39
TRIM65-202ENST00000540128 TIMM13Q9Y5L4 95 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms