RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 C1orf186Q6ZWK4 172 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 SPEM1Q8N4L4 309 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 FBXO18Q8NFZ0 1043 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 SHKBP1Q8TBC3 707 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 NETO1Q8TDF5 533 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 SNX29Q8TEQ0 813 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 MSANTD3Q96H12 275 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 RUSC1Q9BVN2 902 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 LRRC3Q9BY71 257 aa21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 DYNC1LI1Q9Y6G9 523 aaKnown RBP21.79■■□□□ 1.08
LPCAT3-210ENST00000540090 M0QZQ0 153 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 SLC30A4O14863 429 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 HRO43593 1189 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 TOM1L1O75674 476 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 ADRB1P08588 477 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 CPB1P15086 417 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 PTGDRQ13258 359 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 SIM2Q14190 667 aaPredicted RBP21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 PRR23BQ6ZRT6 265 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 RSPRY1Q96DX4 576 aa21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 OXCT2Q9BYC2 517 aaPredicted RBP21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 C8orf33Q9H7E9 229 aaPredicted RBP21.78■■□□□ 1.08
LPCAT3-210ENST00000540090 SFI1A8K8P3 1242 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 CHADO15335 359 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 SLC16A4O15374 487 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 PAPSS2O95340 614 aaPredicted RBP21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 VNN2O95498 520 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 HARSP12081 509 aaKnown RBP21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 CNR2P34972 360 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 YWHAHQ04917 246 aaPredicted RBP21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 FCHO2Q0JRZ9 810 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 NBR1Q14596 966 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 TMC8Q8IU68 726 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 CSGALNACT1Q8TDX6 532 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 RAB34Q9BZG1 259 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 SLITRK6Q9H5Y7 841 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 SEMA4GQ9NTN9 838 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 TUBGCP4Q9UGJ1 667 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 YIPF1Q9Y548 306 aa21.77■■□□□ 1.08
LPCAT3-210ENST00000540090 CHURC1-FNTBB4DL54 471 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 COL4A2P08572 1712 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 LRPAP1P30533 357 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 FNTBP49356 437 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 DMWDQ09019 674 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 PLD1Q13393 1074 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 LRRC32Q14392 662 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 SEZ6Q53EL9 994 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 KRT79Q5XKE5 535 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 YAF2Q8IY57 180 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 SPIRE2Q8WWL2 714 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 LLPHQ9BRT6 129 aaKnown RBP21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 DNAJC25Q9H1X3 360 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 PLEKHA5Q9HAU0 1116 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 KCNG1Q9UIX4 513 aa21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 NOL7Q9UMY1 257 aaKnown RBP21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 TIMM13Q9Y5L4 95 aaPredicted RBP21.76■■□□□ 1.07
LPCAT3-210ENST00000540090 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 A0A1W2PRU2 124 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 K7ESF4 209 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 AARSP49588 968 aaKnown RBP eCLIP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 STRN3Q13033 797 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 DUSP4Q13115 394 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 GPR17Q13304 367 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 NOLC1Q14978 699 aaKnown RBP eCLIP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 ZBTB6Q15916 424 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 CSRP2Q16527 193 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 WDR44Q5JSH3 913 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 ZPBP2Q6X784 338 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 LONP2Q86WA8 852 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 ARID3BQ8IVW6 561 aaPredicted RBP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 TMEM161BQ8NDZ6 487 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 PGLYRP2Q96PD5 576 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 TIPINQ9BVW5 301 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 CRISPLD1Q9H336 500 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 RBM12Q9NTZ6 932 aaKnown RBP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 ANKFY1Q9P2R3 1169 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 LIMCH1Q9UPQ0 1083 aa21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 KMT2BQ9UMN6 2715 aaPredicted RBP21.75■■□□□ 1.07
LPCAT3-210ENST00000540090 MYBPHLA2RUH7 354 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 PP2D1A8MPX8 630 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 CLDN3O15551 220 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 OR4Q2P0C623 313 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 GUCY2CP25092 1073 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 TOB1P50616 345 aaPredicted RBP21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 KPNA1P52294 538 aaPredicted RBP21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 EPHB3P54753 998 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 MCL1Q07820 350 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 GNL2Q13823 731 aaKnown RBP21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 DGKKQ5KSL6 1271 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 PRR23CQ6ZRP0 262 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 KCNK18Q7Z418 384 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 CCDC83Q8IWF9 413 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 TMEM130Q8N3G9 435 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 LRRC3BQ96PB8 259 aa21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.74■■□□□ 1.07
LPCAT3-210ENST00000540090 TTC26A0AVF1 554 aa21.73■■□□□ 1.07
LPCAT3-210ENST00000540090 OR6C75A6NL08 312 aa21.73■■□□□ 1.07
LPCAT3-210ENST00000540090 SLC38A8A6NNN8 435 aa21.73■■□□□ 1.07
LPCAT3-210ENST00000540090 CLTAP09496 248 aa21.73■■□□□ 1.07
LPCAT3-210ENST00000540090 MAPTP10636 758 aaKnown RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms