RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DUSP9Q99956 384 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 NSUN3Q9H649 340 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 NGRNQ9NPE2 291 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 CHST7Q9NS84 486 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 DPP3Q9NY33 737 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 PUF60Q9UHX1 559 aaKnown RBP7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 SIX4Q9UIU6 781 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 RWDD2AQ9UIY3 292 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 FRMD4BQ9Y2L6 1034 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 IRAK3Q9Y616 596 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 C5orf42Q9H799 3197 aa7.54□□□□□ -1.2
LPCAT3-209ENST00000540060 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 C2orf71A6NGG8 1288 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 M0QZQ0 153 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 CETN3O15182 167 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 SPTLC1O15269 473 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TRAPPC3O43617 180 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 LILRB3O75022 631 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TNNC2P02585 160 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 URODP06132 367 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TRIM49P0CI25 452 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TRIM49CP0CI26 452 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TNNI1P19237 187 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 FGFR3P22607 806 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TKTP29401 623 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 POLR2BP30876 1174 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 PSMC2P35998 433 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TAF6P49848 677 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 STX17P56962 302 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 LILRA4P59901 499 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 FKBP3Q00688 224 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 COL19A1Q14993 1142 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 USP41Q3LFD5 358 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TCEAL5Q5H9L2 206 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 C1orf220Q5T0J3 134 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 FAM171A1Q5VUB5 890 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 KIAA0319Q5VV43 1072 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 SCARA3Q6AZY7 606 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TRAPPC11Q7Z392 1133 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 GPR65Q8IYL9 337 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 MICALL1Q8N3F8 863 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 LRRC52Q8N7C0 313 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 MAFAQ8NHW3 353 aaPredicted RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 CACTINQ8WUQ7 758 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 PIK3R5Q8WYR1 880 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 ZNF516Q92618 1163 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 SYAP1Q96A49 352 aaPredicted RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 ZNF560Q96MR9 790 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 CEP63Q96MT8 703 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 POP1Q99575 1024 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 TTPALQ9BTX7 342 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 MRPL17Q9NRX2 175 aaKnown RBP7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 NUB1Q9Y5A7 615 aa7.53□□□□□ -1.2
LPCAT3-209ENST00000540060 PATJQ8NI35 1801 aa7.52□□□□□ -1.2
LPCAT3-209ENST00000540060 C2CD2LO14523 706 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 IKBKBO14920 756 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 SYN3O14994 580 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 KRT19P08727 400 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 EPB41P11171 864 aaKnown RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 CHRM1P11229 460 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 KRT13P13646 458 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PAX3P23760 479 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 ERCC5P28715 1186 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 GTF2F1P35269 517 aaKnown RBP eCLIP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PNPLA4P41247 253 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 NRIP1P48552 1158 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 VAMP7P51809 220 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 AP3M2P53677 418 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 MARSP56192 900 aaKnown RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 HYAL1Q12794 435 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PSMD5Q16401 504 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 STX1AQ16623 288 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 DUSP6Q16828 381 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 DUOXA2Q1HG44 320 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 ZACNQ401N2 412 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 SV2CQ496J9 727 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 ARSIQ5FYB1 569 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 TDRD10Q5VZ19 366 aaKnown RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PRSS55Q6UWB4 352 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 C15orf39Q6ZRI6 1047 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 C11orf57Q6ZUT1 292 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 FILIP1Q7Z7B0 1213 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 USP37Q86T82 979 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 CSGALNACT2Q8N6G5 542 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 MRPL43Q8N983 215 aaKnown RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 LNX1Q8TBB1 728 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 MICAL1Q8TDZ2 1067 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 RIN2Q8WYP3 895 aaPredicted RBP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PPP2R3CQ969Q6 453 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 RXFP1Q9HBX9 757 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 DACH1Q9UI36 760 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 PCDHB8Q9UN66 801 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 AGAP1Q9UPQ3 857 aa7.52□□□□□ -1.21
LPCAT3-209ENST00000540060 OBSL1O75147 1896 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 FSD2A1L4K1 749 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 KPNA7A9QM74 516 aa7.51□□□□□ -1.21
LPCAT3-209ENST00000540060 TULP1O00294 542 aaPredicted RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms