RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 EEF2P13639 858 aaKnown RBP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 HPDP32754 393 aaPredicted RBP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 EIF1AXP47813 144 aaKnown RBP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 NOVP48745 357 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CDK8P49336 464 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 OAZ1P54368 228 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 GJA9P57773 515 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 PTENP60484 403 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CCDC15Q0P6D6 951 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 KCNA10Q16322 511 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 KRT71Q3SY84 523 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 SPDYAQ5MJ70 313 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 TBCELQ5QJ74 424 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 TMEM240Q5SV17 173 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 KRT79Q5XKE5 535 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 DPY19L2P1Q6NXN4 242 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 H2AFVQ71UI9 128 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 TAOK1Q7L7X3 1001 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CCDC65Q8IXS2 484 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 SPICE1Q8N0Z3 855 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 METTL13Q8N6R0 699 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 GRAMD1AQ96CP6 724 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 DNAJC19Q96DA6 116 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 PNMA5Q96PV4 448 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 LSM14BQ9BX40 385 aaKnown RBP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 SAP130Q9H0E3 1048 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 NT5C3AQ9H0P0 336 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 CARD9Q9H257 536 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 SMARCAL1Q9NZC9 954 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 EHD2Q9NZN4 543 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 RASAL2Q9UJF2 1139 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 NAGPAQ9UK23 515 aa8.19□□□□□ -1.1
CCDC60-204ENST00000539847 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.19□□□□□ -1.1
CCDC60-204ENST00000539847 NAV1Q8NEY1 1877 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 A0A1W2PRU2 124 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ZSCAN5CA6NGD5 496 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ARVCFO00192 962 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TLR3O15455 904 aaKnown RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SORBS3O60504 671 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TCEA3O75764 348 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ANP32DO95626 131 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SNAI1O95863 264 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PGK2P07205 417 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 NQO1P15559 274 aaKnown RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 FERP16591 822 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TAL1P17542 331 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SCP2P22307 547 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TMOD1P28289 359 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 POLR2FP61218 127 aaKnown RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 MRPS5P82675 430 aaKnown RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 DAB2P98082 770 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 BNIP1Q12981 228 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ACVR2BQ13705 512 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PPP1R7Q15435 360 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 NFIL3Q16649 462 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 HIBCHQ6NVY1 386 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ALKBH5Q6P6C2 394 aaKnown RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PEX26Q7Z412 305 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 NT5DC3Q86UY8 548 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 KLHL7Q8IXQ5 586 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SLC43A3Q8NBI5 491 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 CHST13Q8NET6 341 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 NEK9Q8TD19 979 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 UBLCP1Q8WVY7 318 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 HERVK_113Q902F9 699 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 RNF34Q969K3 372 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 DYNLL2Q96FJ2 89 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 CDK5RAP3Q96JB5 506 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SCLT1Q96NL6 688 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ASB2Q96Q27 587 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 FAM129BQ96TA1 746 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PSMB7Q99436 277 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 FMO2Q99518 471 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 SH3GL3Q99963 347 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PBX4Q9BYU1 374 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TGIF2Q9GZN2 237 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 GLT8D2Q9H1C3 349 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ARHGEF3Q9NR81 526 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 RAB6BQ9NRW1 208 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ZDHHC18Q9NUE0 388 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 NYAP2Q9P242 653 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 THEGQ9P2T0 379 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 ADAMTS1Q9UHI8 967 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 MSRAQ9UJ68 235 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 AMFRQ9UKV5 643 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 TRAF3IP3Q9Y228 551 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.18□□□□□ -1.1
CCDC60-204ENST00000539847 LRRC42Q9Y546 428 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 PCDHA2Q9Y5H9 948 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 KDM3AQ9Y4C1 1321 aa8.18□□□□□ -1.1
CCDC60-204ENST00000539847 MYH8P13535 1937 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 FRMD3A2A2Y4 597 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SMCO2A6NFE2 343 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 A6NHS1 94 aa8.17□□□□□ -1.1
CCDC60-204ENST00000539847 MIF4GDA9UHW6 222 aaKnown RBP8.17□□□□□ -1.1
CCDC60-204ENST00000539847 SLC16A3O15427 465 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms