RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 RBAK-RBAKDNI3L0D1 243 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 LCA5LO95447 670 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 AKAP5P24588 427 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 MYL6P60660 151 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 CDR2Q01850 454 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 LRMPQ12912 555 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 SEZ6Q53EL9 994 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 ZBTB41Q5SVQ8 909 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 LIN9Q5TKA1 542 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 C9orf57Q5W0N0 161 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 MFSD5Q6N075 450 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 CDR2LQ86X02 465 aaPredicted RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 EFCAB13Q8IY85 973 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 THEM5Q8N1Q8 247 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 LRRC43Q8N309 656 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 CEP120Q8N960 986 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 CTNNBL1Q8WYA6 563 aaPredicted RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 ZNF516Q92618 1163 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 VCPIP1Q96JH7 1222 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 PPP1R10Q96QC0 940 aaKnown RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 LBHD1Q9BQE6 289 aaPredicted RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 COLEC11Q9BWP8 271 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 NT5C1AQ9BXI3 368 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 BCO2Q9BYV7 579 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 NXF1Q9UBU9 619 aaKnown RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 HESX1Q9UBX0 185 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
VTN-202ENST00000539746 BARX2Q9UMQ3 279 aaPredicted RBP12.6□□□□□ -0.39
VTN-202ENST00000539746 ANO9A1A5B4 782 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 TMEM189-UBE2V1I3L0A0 370 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 PIRO00625 290 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 GNA15P30679 374 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 EIF4A3P38919 411 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 MLH1P40692 756 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 MAGEA1P43355 309 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 NSFP46459 744 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 ARID5AQ03989 594 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 INCA1Q0VD86 236 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 SMARCB1Q12824 385 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 PTPN14Q15678 1187 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 NAB2Q15742 525 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 CLUL1Q15846 466 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 TMEM270Q6UE05 265 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 ZNF598Q86UK7 904 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 RHOT2Q8IXI1 618 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 SYCE1Q8N0S2 351 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 CCAR2Q8N163 923 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 TMEM35BQ8NCS4 154 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 DBF4BQ8NFT6 615 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 WNT8BQ93098 351 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 AGPAT1Q99943 283 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 PRDM5Q9NQX1 630 aaPredicted RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 SEPT11Q9NVA2 429 aaKnown RBP12.59□□□□□ -0.39
VTN-202ENST00000539746 PPP2R2CQ9Y2T4 447 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 NR2E3Q9Y5X4 410 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 RALGAPA2Q2PPJ7 1873 aa12.59□□□□□ -0.39
VTN-202ENST00000539746 ANKRD62A6NC57 917 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 BTNL10A8MVZ5 291 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 FOXN3O00409 490 aaPredicted RBP12.58□□□□□ -0.4
VTN-202ENST00000539746 PODXLO00592 558 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 ENPP3O14638 875 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 LRRN2O75325 713 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 VNN1O95497 513 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 H2AFZP0C0S5 128 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 SETSIPP0DME0 302 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 VDRP11473 427 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 CYP11B1P15538 503 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 PPM1AP35813 382 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 KLK7P49862 253 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 VAV2P52735 878 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 CREMQ03060 361 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 TAP1Q03518 808 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 SGO2Q562F6 1265 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 DNTTIP2Q5QJE6 756 aaKnown RBP12.58□□□□□ -0.4
VTN-202ENST00000539746 LMBRD2Q68DH5 695 aaPredicted RBP12.58□□□□□ -0.4
VTN-202ENST00000539746 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
VTN-202ENST00000539746 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 DSTYKQ6XUX3 929 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 H2AFVQ71UI9 128 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 IRF2BP2Q7Z5L9 587 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
VTN-202ENST00000539746 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 TRIM58Q8NG06 486 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 SEMA4DQ92854 862 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 GAD1Q99259 594 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 NCAPGQ9BPX3 1015 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 XYLT2Q9H1B5 865 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 RWDD3Q9Y3V2 267 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 SNX9Q9Y5X1 595 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
VTN-202ENST00000539746 A0A0A6YYK5 440 aaPredicted RBP12.57□□□□□ -0.4
VTN-202ENST00000539746 SOWAHDA6NJG2 315 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 NBNO60934 754 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 RTN2O75298 545 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 ALDH2P05091 517 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 CALB1P05937 261 aa12.57□□□□□ -0.4
VTN-202ENST00000539746 TYMPP19971 482 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms