RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 GTF2F1P35269 517 aaKnown RBP eCLIP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 NRIP1P48552 1158 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 AP3M2P53677 418 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 MCCD1P59942 119 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 TYRO3Q06418 890 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 ENPEPQ07075 957 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 PPP3CAQ08209 521 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 HYAL1Q12794 435 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 BIRC3Q13489 604 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 SV2CQ496J9 727 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 FRMD5Q7Z6J6 570 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 USP37Q86T82 979 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 LRRC52Q8N7C0 313 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 MAFAQ8NHW3 353 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 LNX1Q8TBB1 728 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 SENP8Q96LD8 212 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 COL25A1Q9BXS0 654 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 IGFLR1Q9H665 355 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 TLE6Q9H808 572 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 ARMCX3Q9UH62 379 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 PCDHB8Q9UN66 801 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 R3HCC1Q9Y3T6 440 aaKnown RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 TIMM13Q9Y5L4 95 aaPredicted RBP13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 IRAK3Q9Y616 596 aa13.7□□□□□ -0.22
TSPAN9-207ENST00000539631 KPNA7A9QM74 516 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 SYN3O14994 580 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 VNN1O95497 513 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 FGFR1OPO95684 399 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 CNPP09543 421 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 RPL17P18621 184 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 PAX3P23760 479 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 PNPLA4P41247 253 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 GCLMP48507 274 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 PSMD5Q16401 504 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 DUSP6Q16828 381 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 TPD52L1Q16890 204 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 ZACNQ401N2 412 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 CT47A1Q5JQC4 288 aaPredicted RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 C15orf39Q6ZRI6 1047 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 SV2AQ7L0J3 742 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 PIK3R5Q8WYR1 880 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 HPDLQ96IR7 371 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 KLHL5Q96PQ7 755 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 DNAJC25Q9H1X3 360 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 RXFP1Q9HBX9 757 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 METTL14Q9HCE5 456 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 PRRC2BQ5JSZ5 2229 aaKnown RBP13.69□□□□□ -0.22
TSPAN9-207ENST00000539631 MTCL1Q9Y4B5 1905 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 SYCE3A1L190 88 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 CYB561D2O14569 222 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 CLASP2O75122 1294 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 LETM1O95202 739 aaPredicted RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 GNA14O95837 355 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 ODC1P11926 461 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 MYL6P60660 151 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 TRPC3Q13507 836 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 NCOA4Q13772 614 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 MRPL58Q14197 206 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 IRF2BP1Q8IU81 584 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 GLYCTKQ8IVS8 523 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 GPR65Q8IYL9 337 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 PPP2R3CQ969Q6 453 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 ELMO3Q96BJ8 720 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 CNOT6LQ96LI5 555 aaKnown RBP13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 FUCA2Q9BTY2 467 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 EMILIN2Q9BXX0 1053 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 TMEM8AQ9HCN3 771 aa13.68□□□□□ -0.22
TSPAN9-207ENST00000539631 TEX28O15482 410 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 LINC01565O15544 149 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 ADAM12O43184 909 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 HLA-DRAP01903 254 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CCDC192P0DO97 292 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 TYMPP19971 482 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 GTF2H1P32780 548 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 MARSP56192 900 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 RBM10P98175 930 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 MYO1EQ12965 1108 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 SKIV2LQ15477 1246 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 ANO6Q4KMQ2 910 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CBWD6Q4V339 395 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CBWD3Q5JTY5 395 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CBWD5Q5RIA9 395 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 PDXDC1Q6P996 788 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 RSPO2Q6UXX9 243 aaPredicted RBP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 ANKS3Q6ZW76 656 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CREBRFQ8IUR6 639 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 TRIM59Q8IWR1 403 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 APPL2Q8NEU8 664 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 ENOX1Q8TC92 643 aaKnown RBP13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 TAS1R2Q8TE23 839 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 CLSTN3Q9BQT9 956 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 XYLT2Q9H1B5 865 aa13.67□□□□□ -0.22
TSPAN9-207ENST00000539631 THAP9Q9H5L6 903 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms