RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 SYCP2LQ5T4T6 812 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 CPT1CQ8TCG5 803 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 KBTBD7Q8WVZ9 684 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 APIPQ96GX9 242 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 C20orf173Q96LM9 149 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 P2RX7Q99572 595 aaKnown RBP8.17□□□□□ -1.1
TRAV11-201ENST00000539512 ATP6V0A4Q9HBG4 840 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 CD248Q9HCU0 757 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 TRPM5Q9NZQ8 1165 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.17□□□□□ -1.1
TRAV11-201ENST00000539512 SLC45A2Q9UMX9 530 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 PAXBP1Q9Y5B6 917 aa8.17□□□□□ -1.1
TRAV11-201ENST00000539512 KLRG2A4D1S0 409 aaPredicted RBP8.16□□□□□ -1.1
TRAV11-201ENST00000539512 FOXN3O00409 490 aaPredicted RBP8.16□□□□□ -1.1
TRAV11-201ENST00000539512 TRIM24O15164 1050 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 MYL3P08590 195 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 ZNF844Q08AG5 666 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 AMOTQ4VCS5 1084 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 RHOT2Q8IXI1 618 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 PALM2Q8IXS6 379 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 PNKPQ96T60 521 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 SMOQ99835 787 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 CNPPD1Q9BV87 410 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 RNF181Q9P0P0 153 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 JAG2Q9Y219 1238 aa8.16□□□□□ -1.1
TRAV11-201ENST00000539512 KRTAP23-1A1A580 65 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 M0QYG6 137 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 LEFTY2O00292 366 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 FOXD2O60548 495 aaPredicted RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 ZKSCAN1P17029 563 aaPredicted RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 GCSHP23434 173 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 CNGA2Q16280 664 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 C1QL3Q5VWW1 255 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 LMBRD2Q68DH5 695 aaPredicted RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 HTR3DQ70Z44 454 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 COL23A1Q86Y22 540 aaPredicted RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 OR56A1Q8NGH5 318 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 ANKS1AQ92625 1134 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 MRGPRX1Q96LB2 322 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 TINAGL1Q9GZM7 467 aaPredicted RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 BTBD1Q9H0C5 482 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 PNPLA8Q9NP80 782 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 SACM1LQ9NTJ5 587 aa8.15□□□□□ -1.1
TRAV11-201ENST00000539512 MTO1Q9Y2Z2 717 aaKnown RBP8.15□□□□□ -1.1
TRAV11-201ENST00000539512 HLA-DOAP06340 250 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 THP07101 528 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 EN2P19622 333 aaPredicted RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 AK2P54819 239 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 SUMO3P55854 103 aaPredicted RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 POU6F2P78424 691 aaPredicted RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 SATB1Q01826 763 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 RAB32Q13637 225 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 CSRP2Q16527 193 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 LONRF1Q17RB8 773 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 NOMO2Q5JPE7 1267 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 AGAP9Q5VTM2 703 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 GDF7Q7Z4P5 450 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 USP37Q86T82 979 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 SYT12Q8IV01 421 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 KRT78Q8N1N4 520 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 MPP5Q8N3R9 675 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 TMIEQ8NEW7 156 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 SVIPQ8NHG7 77 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 DVL3Q92997 716 aaPredicted RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 KLHL32Q96NJ5 620 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 WWC2-AS2Q96NR7 200 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 MPHOSPH6Q99547 160 aaKnown RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 ZNF700Q9H0M5 742 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 GPR35Q9HC97 309 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 PARPBPQ9NWS1 579 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 AFF4Q9UHB7 1163 aaKnown RBP8.14□□□□□ -1.11
TRAV11-201ENST00000539512 CORO2BQ9UQ03 480 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 MED16Q9Y2X0 877 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 PLEKHM1Q9Y4G2 1056 aa8.14□□□□□ -1.11
TRAV11-201ENST00000539512 ADAMTS20P59510 1910 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 XDHP47989 1333 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 BTN3A1O00481 513 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 TBX3O15119 743 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 RPS6KA4O75676 772 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 UNC5CO95185 931 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 GPANK1O95872 356 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 GRPP07492 148 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 FCER1AP12319 257 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 SLC13A2Q13183 592 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 SPDYE7PQ495Y7 208 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 PDPRQ8NCN5 879 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 ACRBPQ8NEB7 543 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 PARD3BQ8TEW8 1205 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 MARS2Q96GW9 593 aaKnown RBP8.13□□□□□ -1.11
TRAV11-201ENST00000539512 MOGAT1Q96PD6 335 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 TRIM54Q9BYV2 358 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 SLC52A1Q9NWF4 448 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 CPNE7Q9UBL6 633 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 TMX2Q9Y320 296 aa8.13□□□□□ -1.11
TRAV11-201ENST00000539512 USP19O94966 1318 aa8.12□□□□□ -1.11
TRAV11-201ENST00000539512 A0A1B0GTW7 788 aa8.12□□□□□ -1.11
TRAV11-201ENST00000539512 MYO1FO00160 1098 aa8.12□□□□□ -1.11
TRAV11-201ENST00000539512 POLRMTO00411 1230 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms