RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 PDZD7Q9H5P4 517 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 TUFT1Q9NNX1 390 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 GPRC5CQ9NQ84 441 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 KCNH3Q9ULD8 1083 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 POLIQ9UNA4 740 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 DCHS1Q96JQ0 3298 aa9.8□□□□□ -0.84
MRE11-208ENST00000538923 BTBD18B2RXH4 712 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 CCL16O15467 120 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 LAMTOR5O43504 91 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 TRAPPC3O43617 180 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 KINO60870 393 aaKnown RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 DTNBO60941 627 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 RECQL4O94761 1208 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 SPATA31C1P0DKV0 1188 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 OR1D2P34982 312 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 MAGEA9P43362 315 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 NAMPTP43490 491 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 RBM25P49756 843 aaKnown RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 SMTNP53814 917 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 RAB33AQ14088 237 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 UBXN2BQ14CS0 331 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 NAB2Q15742 525 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 PABPC1LQ4VXU2 614 aaKnown RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 SLC44A4Q53GD3 710 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 AXDND1Q5T1B0 1012 aaPredicted RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 RSPO2Q6UXX9 243 aaPredicted RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 CATSPER3Q86XQ3 398 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 DIS3L2Q8IYB7 885 aaKnown RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 MAML2Q8IZL2 1156 aaPredicted RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 ERMNQ8TAM6 284 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 DEPTORQ8TB45 409 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 NACC1Q96RE7 527 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 SPATA6Q9NWH7 488 aaPredicted RBP9.79□□□□□ -0.84
MRE11-208ENST00000538923 SNTG2Q9NY99 539 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 MTRRQ9UBK8 725 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 FBXO4Q9UKT5 387 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 CACNA1HO95180 2353 aa9.79□□□□□ -0.84
MRE11-208ENST00000538923 DMXL1Q9Y485 3027 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 A0A087WWV3 80 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 FAM170BA6NMN3 283 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 TMEM189-UBE2V1I3L0A0 370 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ACKR2O00590 384 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ADAM12O43184 909 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 LRRN2O75325 713 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 B3GAT3O94766 335 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 PRKCBP05771 671 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 FDPSP14324 419 aaKnown RBP9.78□□□□□ -0.84
MRE11-208ENST00000538923 EFNA5P52803 228 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ANAPC15P60006 121 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 PUM1Q14671 1186 aaKnown RBP eCLIP9.78□□□□□ -0.84
MRE11-208ENST00000538923 PPP2R5AQ15172 486 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 DCAF4L1Q3SXM0 396 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ZBTB41Q5SVQ8 909 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ANKS3Q6ZW76 656 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 TAS1R3Q7RTX0 852 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 APBB1IPQ7Z5R6 666 aaPredicted RBP9.78□□□□□ -0.84
MRE11-208ENST00000538923 NOSTRINQ8IVI9 506 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 NPAS3Q8IXF0 933 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 ITFG1Q8TB96 612 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 UROC1Q96N76 676 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 NELL2Q99435 816 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 POLR3CQ9BUI4 534 aaPredicted RBP9.78□□□□□ -0.84
MRE11-208ENST00000538923 CCDC113Q9H0I3 377 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 GDE1Q9NZC3 331 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 NXF1Q9UBU9 619 aaKnown RBP9.78□□□□□ -0.84
MRE11-208ENST00000538923 PCDHGA2Q9Y5H1 932 aa9.78□□□□□ -0.84
MRE11-208ENST00000538923 WDR87Q6ZQQ6 2873 aa9.77□□□□□ -0.84
MRE11-208ENST00000538923 ARHGEF35A5YM69 484 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 A6NJY4 79 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 SFI1A8K8P3 1242 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 NCAM2O15394 837 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 MED24O75448 989 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 ECI2O75521 394 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 LIG1P18858 919 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 CYP11B2P19099 503 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 FGFR3P22607 806 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 RPA1P27694 616 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 MCM7P33993 719 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 CLCNKBP51801 687 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 CSTF1Q05048 431 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 ZNF852Q6ZMS4 543 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 GPR161Q8N6U8 529 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 NECAB1Q8N987 351 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 SUMF1Q8NBK3 374 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 ATRIPQ8WXE1 791 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 BSNDQ8WZ55 320 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 GTF3C6Q969F1 213 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 IFT74Q96LB3 600 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 PPP1R10Q96QC0 940 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 CXCL16Q9H2A7 254 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 LTB4R2Q9NPC1 389 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 HCFC1R1Q9NWW0 138 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 DLL3Q9NYJ7 618 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 DNMT3BQ9UBC3 853 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 MRPS17Q9Y2R5 130 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 GDAQ9Y2T3 454 aa9.77□□□□□ -0.85
MRE11-208ENST00000538923 MRPS23Q9Y3D9 190 aaKnown RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 MTF2Q9Y483 593 aaPredicted RBP9.77□□□□□ -0.85
MRE11-208ENST00000538923 BACE2Q9Y5Z0 518 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms