RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 HAS3O00219 553 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 SART1O43290 800 aaKnown RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 RAD51CO43502 376 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 GPR32O75388 356 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 LSM8O95777 96 aaKnown RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 WEE2P0C1S8 567 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 ATICP31939 592 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 TNNT3P45378 269 aaPredicted RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 C1QBPQ07021 282 aaKnown RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 SMC1AQ14683 1233 aaKnown RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 PCBP1Q15365 356 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATL3-203ENST00000538786 DCAF4L1Q3SXM0 396 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 ZNF667Q5HYK9 610 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 APBB1IPQ7Z5R6 666 aaPredicted RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
ATL3-203ENST00000538786 CXorf38Q8TB03 319 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 BTBD6Q96KE9 485 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 ACAP3Q96P50 834 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 SLITRK6Q9H5Y7 841 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 ADAM22Q9P0K1 906 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 ANAPC7Q9UJX3 599 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 C2CD2Q9Y426 696 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 PCDHA3Q9Y5H8 950 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 TLL2Q9Y6L7 1015 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 EVPLQ92817 2033 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 MROH7Q68CQ1 1323 aa15.79■□□□□ 0.12
ATL3-203ENST00000538786 CYP2C9P11712 490 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 ITGA4P13612 1032 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 GRM5P41594 1212 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 PSEN2P49810 448 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 EPHB4P54760 987 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 GUCY2DQ02846 1103 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 CRHR2Q13324 411 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 ZNF211Q13398 564 aaPredicted RBP15.78■□□□□ 0.12
ATL3-203ENST00000538786 SCARA5Q6ZMJ2 495 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 NT5DC4Q86YG4 428 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 CD302Q8IX05 232 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 CCDC102AQ96A19 550 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 BCO2Q9BYV7 579 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 ACBD3Q9H3P7 528 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 EPB41L5Q9HCM4 733 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 NXF1Q9UBU9 619 aaKnown RBP15.78■□□□□ 0.12
ATL3-203ENST00000538786 ITGB3P05106 788 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 MARCKSL1P49006 195 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 ADAM17P78536 824 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 GPS2Q13227 327 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 TMEM132DQ14C87 1099 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 PPP2R5EQ16537 467 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 WDR72Q3MJ13 1102 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 EMBQ6PCB8 327 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 C11orf70Q9BRQ4 267 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 ZNF518BQ9C0D4 1074 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 DDX47Q9H0S4 455 aaKnown RBP15.78■□□□□ 0.12
ATL3-203ENST00000538786 VRTNQ9H8Y1 702 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 MRPL47Q9HD33 250 aaKnown RBP15.78■□□□□ 0.12
ATL3-203ENST00000538786 POLIQ9UNA4 740 aa15.78■□□□□ 0.12
ATL3-203ENST00000538786 GOLGA6L10A0A0M3HER8 536 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 MYL3P08590 195 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 HSPA6P17066 643 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 FGFR4P22455 802 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 MMP8P22894 467 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 HOXA11P31270 313 aaPredicted RBP15.77■□□□□ 0.12
ATL3-203ENST00000538786 SLC1A1P43005 524 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 IRX5P78411 483 aaPredicted RBP15.77■□□□□ 0.12
ATL3-203ENST00000538786 TMEM62Q0P6H9 643 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 PTP4A2Q12974 167 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 ZNF394Q53GI3 561 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 PLEKHA7Q6IQ23 1121 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 MMS22LQ6ZRQ5 1243 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 CATSPER4Q7RTX7 472 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 CCDC26Q8TAB7 109 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 KATNAL1Q9BW62 490 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 ITGA11Q9UKX5 1188 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 PCDHGC3Q9UN70 934 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 GINS2Q9Y248 185 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 SCINQ9Y6U3 715 aa15.77■□□□□ 0.12
ATL3-203ENST00000538786 ZSCAN5CA6NGD5 496 aaPredicted RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 MYO1FO00160 1098 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 BRD2P25440 801 aaKnown RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 SSTR3P32745 418 aaPredicted RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 RWDD2BP57060 319 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 PAK2Q13177 524 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 MAMLD1Q13495 774 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 HIC1Q14526 733 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 C2CD6Q53TS8 623 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 SEL1L2Q5TEA6 688 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 SLC27A1Q6PCB7 646 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 RUFY4Q6ZNE9 571 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 MAATS1Q7Z4T9 603 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 EIF1ADQ8N9N8 165 aaKnown RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 TMEM35BQ8NCS4 154 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 PLEKHA5Q9HAU0 1116 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 NPTXRO95502 500 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 PAEPP09466 180 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 P4HA1P13674 534 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 EIF4BP23588 611 aaKnown RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 CDH5P33151 784 aaPredicted RBP15.76■□□□□ 0.11
ATL3-203ENST00000538786 TM4SF4P48230 202 aa15.76■□□□□ 0.11
ATL3-203ENST00000538786 LACTBP83111 547 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms