RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 KRT39Q6A163 491 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 GBP6Q6ZN66 633 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 COLGALT1Q8NBJ5 622 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 IQCDQ96DY2 449 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 UROC1Q96N76 676 aa18.53■□□□□ 0.56
CLN6-202ENST00000538696 BAG1Q99933 345 aaPredicted RBP18.53■□□□□ 0.56
CLN6-202ENST00000538696 LUC7L2Q9Y383 392 aaKnown RBP18.53■□□□□ 0.56
CLN6-202ENST00000538696 COL4A4P53420 1690 aaPredicted RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 ANO9A1A5B4 782 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 GTPBP10A4D1E9 387 aaKnown RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 F8W810 466 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 PIRO00625 290 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 NRDCO43847 1150 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 GALTP07902 379 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 IGFBP6P24592 240 aaPredicted RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 BCAR1P56945 870 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 ZBED6P86452 979 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 RAB30Q15771 203 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 UPP1Q16831 310 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 EXOC3L4Q17RC7 722 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 CD300LGQ6UXG3 332 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 SPRED2Q7Z698 418 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 C3orf58Q8NDZ4 430 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 CLP1Q92989 425 aaKnown RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 DNAJC7Q99615 494 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 NKX2-4Q9H2Z4 354 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 SIX2Q9NPC8 291 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 RRAGDQ9NQL2 400 aaPredicted RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 MARCH5Q9NX47 278 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 GCNT4Q9P109 453 aa18.52■□□□□ 0.56
CLN6-202ENST00000538696 PRG3Q9Y2Y8 225 aaPredicted RBP18.52■□□□□ 0.56
CLN6-202ENST00000538696 NRP1O14786 923 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 KIF4AO95239 1232 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 CST3P01034 146 aaPredicted RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 HLA-DRAP01903 254 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 KRT19P08727 400 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 PON1P27169 355 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 RPL9P32969 192 aaKnown RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 PDXDC1Q6P996 788 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 KCNT2Q6UVM3 1135 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 TMEM173Q86WV6 379 aaPredicted RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 OR8K1Q8NGG5 319 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 TAS1R2Q8TE23 839 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 BCL7CQ8WUZ0 217 aaPredicted RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 BAP1Q92560 729 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 DDX27Q96GQ7 796 aaKnown RBP18.51■□□□□ 0.55
CLN6-202ENST00000538696 ZNF558Q96NG5 402 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 CEP72Q9P209 647 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 AGAP1Q9UPQ3 857 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 ATG2AQ2TAZ0 1938 aa18.51■□□□□ 0.55
CLN6-202ENST00000538696 NT5C1B-RDH14C9J2C7 533 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 TMEM189-UBE2V1I3L0A0 370 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 PMM2O15305 246 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 PHACTR2O75167 634 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 LRRN2O75325 713 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 ITGB1P05556 798 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 PIK3CAP42336 1068 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 RBP5P82980 135 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 SMAD3P84022 425 aaKnown RBP18.5■□□□□ 0.55
CLN6-202ENST00000538696 NCOA4Q13772 614 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 EPC2Q52LR7 807 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 SLC39A11Q8N1S5 342 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 HASPINQ8TF76 798 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 SEMA4DQ92854 862 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 EDEM3Q9BZQ6 932 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 INTS2Q9H0H0 1204 aaKnown RBP18.5■□□□□ 0.55
CLN6-202ENST00000538696 NLRC4Q9NPP4 1024 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 PLCB1Q9NQ66 1216 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 MSRAQ9UJ68 235 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 AJAP1Q9UKB5 411 aaPredicted RBP18.5■□□□□ 0.55
CLN6-202ENST00000538696 FAN1Q9Y2M0 1017 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 COQ4Q9Y3A0 265 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
CLN6-202ENST00000538696 SOWAHDA6NJG2 315 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 P4HA2O15460 535 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ZNF500O60304 480 aaPredicted RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 ALDH2P05091 517 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 MYL6P60660 151 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 POLR2FP61218 127 aaKnown RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 TAP1Q03518 808 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 TRPC3Q13507 836 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 LRIT3Q3SXY7 679 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 KLHDC7AQ5VTJ3 777 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 E4F1Q66K89 784 aaPredicted RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 DCLRE1AQ6PJP8 1040 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 LRRC52Q8N7C0 313 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ELMO3Q96BJ8 720 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ZNF560Q96MR9 790 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 C17orf80Q9BSJ5 609 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 COLEC11Q9BWP8 271 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 FHOD1Q9Y613 1164 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 RANBP2P49792 3224 aaKnown RBP18.49■□□□□ 0.55
CLN6-202ENST00000538696 LRRC53A6NM62 1247 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 SPTLC1O15269 473 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ARHGAP6O43182 974 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 B3GAT3O94766 335 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 DNAJB2P25686 324 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 CTNNB1P35222 781 aa18.49■□□□□ 0.55
CLN6-202ENST00000538696 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms