RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ATF7IP2Q5U623 682 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 WDR78Q5VTH9 848 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 DPY19L2Q6NUT2 758 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 EFCAB12Q6NXP0 572 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 NFKBIZQ9BYH8 718 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 PABPC3Q9H361 631 aaKnown RBP12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
SLC28A1-204ENST00000538177 ECEL1O95672 775 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 NUDT17P0C025 328 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 MAN1A1P33908 653 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 KCNJ1P48048 391 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 ATP1A2P50993 1020 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 PMS2P54278 862 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 POU5F1BQ06416 359 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 SNAPC2Q13487 334 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 SGO2Q562F6 1265 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 RHOT1Q8IXI2 618 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 FEZF2Q8TBJ5 459 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 GTF3C2Q8WUA4 911 aaPredicted RBP12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 ART4Q93070 314 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 FAM212AQ96EL1 285 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 XYLT2Q9H1B5 865 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 CISHQ9NSE2 258 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 PARVAQ9NVD7 372 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 MTRF1LQ9UGC7 380 aaKnown RBP12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.47
SLC28A1-204ENST00000538177 MCM3APO60318 1980 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 INO80B-WBP1J3KQ70 363 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 C22orf31O95567 290 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 GJB1P08034 283 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 SSTR3P32745 418 aaPredicted RBP12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 CLCN3P51790 818 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 MBTD1Q05BQ5 628 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 PDCLQ13371 301 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 TRPC3Q13507 836 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF568Q3ZCX4 644 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF484Q5JVG2 852 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 EEF1DP3Q658K8 133 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 SYDE1Q6ZW31 735 aaPredicted RBP12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ARMCX2Q7L311 632 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 KATNAL2Q8IYT4 538 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ARFGAP2Q8N6H7 521 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 C1orf54Q8WWF1 131 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 NLRP4Q96MN2 994 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 HERPUD2Q9BSE4 406 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 INO80BQ9C086 356 aaPredicted RBP12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 RNPEPQ9H4A4 650 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 ERAP1Q9NZ08 941 aa12.14□□□□□ -0.47
SLC28A1-204ENST00000538177 TCRBV5S1A1TA0A578 114 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 B4GALT5O43286 388 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM191BP0C7N4 346 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 YBX3P16989 372 aaKnown RBP eCLIP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 CDH5P33151 784 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TAS2R40P59535 323 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 LAMC2Q13753 1193 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 FAM187BQ17R55 369 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 THNSL1Q8IYQ7 743 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 DCLK3Q9C098 648 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF518BQ9C0D4 1074 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 CDT1Q9H211 546 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 MINDY3Q9H8M7 445 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 HOMER3Q9NSC5 361 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 IP6K2Q9UHH9 426 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 PCDHGC3Q9UN70 934 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 PTPN22Q9Y2R2 807 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM191CA6NGB0 347 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TLR3O15455 904 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ZEB2O60315 1214 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 IL18RAPO95256 599 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TNNC2P02585 160 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 CALB1P05937 261 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 MDH1P40925 334 aaKnown RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ASPAP45381 313 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 KLF1Q13351 362 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ZNF699Q32M78 642 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TTC19Q6DKK2 380 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TAPT1Q6NXT6 567 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 IFNLR1Q8IU57 520 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 EXD1Q8NHP7 514 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 RNF25Q96BH1 459 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 ANKRD36BP1Q96IX9 119 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 CENPHQ9H3R5 247 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 CHST7Q9NS84 486 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 WHRNQ9P202 907 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 LCMT1Q9UIC8 334 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 PNMA3Q9UL41 463 aa12.13□□□□□ -0.47
SLC28A1-204ENST00000538177 RBM47A0AV96 593 aaKnown RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 O00370 1275 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 IQCF3P0C7M6 154 aa12.12□□□□□ -0.47
SLC28A1-204ENST00000538177 CYP2C8P10632 490 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms