RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CLTAP09496 248 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 CETN2P41208 172 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 PTGIRP43119 386 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 NAMPTP43490 491 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 BPIFB4P59827 614 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 ADCY2Q08462 1091 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 PSMD6Q15008 389 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 SMAD1Q15797 465 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 TTC31Q49AM3 519 aaPredicted RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 TXNRD3NBQ6F5E7 133 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 SLFN12LQ6IEE8 588 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 ERICH1Q86X53 443 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 RDM1Q8NG50 284 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 UBA3Q8TBC4 463 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 PRMT1Q99873 361 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 NTPCRQ9BSD7 190 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 OSBPL8Q9BZF1 889 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 PABPC3Q9H361 631 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 ST6GALNAC4Q9H4F1 302 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 CISHQ9NSE2 258 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 INTS9Q9NV88 658 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 GRHL1Q9NZI5 618 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 DIS3Q9Y2L1 958 aaKnown RBP9.25□□□□□ -0.93
UBE3B-208ENST00000538070 DOCK5Q9H7D0 1870 aa9.25□□□□□ -0.93
UBE3B-208ENST00000538070 COL2A1P02458 1487 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 GMNCA6NCL1 334 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 H0YCG3 227 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 H0YGN5 161 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 SGK1O00141 431 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 PODXLO00592 558 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ZNF286BP0CG31 522 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 POU5F1Q01860 360 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 NEDD9Q14511 834 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 XRRA1Q6P2D8 792 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 SCYL2Q6P3W7 929 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 CCDC121Q6ZUS5 278 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MREGQ8N565 214 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 HSPH1Q92598 858 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ELAC2Q9BQ52 826 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MRPL4Q9BYD3 311 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 CDC42EP4Q9H3Q1 356 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 VPS37BQ9H9H4 285 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 C17orf75Q9HAS0 396 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 NFS1Q9Y697 457 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 IVNS1ABPQ9Y6Y0 642 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MYPNQ86TC9 1320 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 F5H423 210 aaPredicted RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ADCY3O60266 1144 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 GRIN3BO60391 1043 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 BANF1O75531 89 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 GCNT1Q02742 428 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 DUOXA2Q1HG44 320 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ANKMY2Q8IV38 441 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 SRRM1Q8IYB3 904 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ABRAQ8N0Z2 381 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 IPO4Q8TEX9 1081 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 VTI1AQ96AJ9 217 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MMP19Q99542 508 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 CALN1Q9BXU9 219 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 CEP83Q9Y592 693 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 TNNC2P02585 160 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 RGS7P49802 495 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MAMLD1Q13495 774 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 TMED2Q15363 201 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 P3H1Q32P28 736 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 IZUMO3Q5VZ72 239 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 MFSD7Q6UXD7 560 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 LBX2Q6XYB7 198 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 NLRP7Q8WX94 980 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
UBE3B-208ENST00000538070 KIAA1586Q9HCI6 787 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 ZDHHC18Q9NUE0 388 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 COQ4Q9Y3A0 265 aa9.24□□□□□ -0.93
UBE3B-208ENST00000538070 A0A0B4J269 797 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 PSMA2P25787 234 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 IREB2P48200 963 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 NRLP54845 237 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 PPP2R5EQ16537 467 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 AMHR2Q16671 573 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 LRIG3Q6UXM1 1119 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 ANKS1BQ7Z6G8 1248 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 RHOT1Q8IXI2 618 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 GLIS1Q8NBF1 620 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 CHST13Q8NET6 341 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 FBXL18Q96ME1 805 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 HEXIM2Q96MH2 286 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 CGRRF1Q99675 332 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 FHDC1Q9C0D6 1143 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 MINDY3Q9H8M7 445 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 SAYSD1Q9NPB0 183 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 A0A087WZ62 844 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 SHOX2O60902 331 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 SPAG7O75391 227 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 LDHAP00338 332 aaKnown RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 ITGB3P05106 788 aa9.23□□□□□ -0.93
UBE3B-208ENST00000538070 UNGP13051 313 aaPredicted RBP9.23□□□□□ -0.93
UBE3B-208ENST00000538070 CORO7P57737 925 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms