RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 TUBB8Q3ZCM7 444 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PLEKHA7Q6IQ23 1121 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PHLDB2Q86SQ0 1253 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 CCDC105Q8IYK2 499 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 ZDHHC14Q8IZN3 488 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.68■□□□□ 0.26
MKS1-204ENST00000537529 ZNF606Q8WXB4 792 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PKNOX2Q96KN3 472 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 ATP6V1G3Q96LB4 118 aa16.68■□□□□ 0.26
MKS1-204ENST00000537529 PASKQ96RG2 1323 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 H0YGN5 161 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 B4GALT5O43286 388 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 PSTPIP1O43586 416 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 MYZAPP0CAP1 466 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 ADORA2AP29274 412 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 HNRNPH2P55795 449 aaKnown RBP16.67■□□□□ 0.26
MKS1-204ENST00000537529 POU5F1BQ06416 359 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 MAMLD1Q13495 774 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 ZNF668Q96K58 619 aaPredicted RBP16.67■□□□□ 0.26
MKS1-204ENST00000537529 CAPS2Q9BXY5 557 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 CDT1Q9H211 546 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 RNPEPQ9H4A4 650 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 LRRC19Q9H756 370 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 RPF1Q9H9Y2 349 aaKnown RBP16.67■□□□□ 0.26
MKS1-204ENST00000537529 TMBIM4Q9HC24 238 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 PARVAQ9NVD7 372 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 SNX24Q9Y343 169 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 NFS1Q9Y697 457 aa16.67■□□□□ 0.26
MKS1-204ENST00000537529 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 PDHXO00330 501 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 MAGEB2O15479 319 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 CALB1P05937 261 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 INSRRP14616 1297 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 CD58P19256 250 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 MAN1A1P33908 653 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 IGBP1P78318 339 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 C2CD6Q53TS8 623 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 EEF1DP3Q658K8 133 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 KCTD16Q68DU8 428 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 TAPT1Q6NXT6 567 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 LLGL2Q6P1M3 1020 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 RUFY4Q6ZNE9 571 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 RHOT1Q8IXI2 618 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 SH2D3CQ8N5H7 860 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 PPTC7Q8NI37 304 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 FAM129AQ9BZQ8 928 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 CISHQ9NSE2 258 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 LCMT1Q9UIC8 334 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 COL1A2P08123 1366 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 ECEL1O95672 775 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 SSTR3P32745 418 aaPredicted RBP16.66■□□□□ 0.26
MKS1-204ENST00000537529 OSTNP61366 133 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 FAM187BQ17R55 369 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 SGO2Q562F6 1265 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 KDM7AQ6ZMT4 941 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 PNMA8AQ86V59 439 aaPredicted RBP16.66■□□□□ 0.26
MKS1-204ENST00000537529 EMID1Q96A84 441 aaPredicted RBP16.66■□□□□ 0.26
MKS1-204ENST00000537529 DDX27Q96GQ7 796 aaKnown RBP16.66■□□□□ 0.26
MKS1-204ENST00000537529 TXLNGYQ9BZA5 131 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 GRHL1Q9NZI5 618 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 MTRF1LQ9UGC7 380 aaKnown RBP16.66■□□□□ 0.26
MKS1-204ENST00000537529 IVNS1ABPQ9Y6Y0 642 aa16.66■□□□□ 0.26
MKS1-204ENST00000537529 RBM47A0AV96 593 aaKnown RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 MMP8P22894 467 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 RPL21P46778 160 aaKnown RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 GTF2A2P52657 109 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 PLTPP55058 493 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 TNFAIP2Q03169 654 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZNF844Q08AG5 666 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 KCTD19Q17RG1 926 aaPredicted RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 SCARA3Q6AZY7 606 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZDHHC24Q6UX98 284 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZNF467Q7Z7K2 595 aaPredicted RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 TMEM35BQ8NCS4 154 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 SLCO2A1Q92959 643 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZBTB10Q96DT7 871 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZNF518BQ9C0D4 1074 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 IP6K2Q9UHH9 426 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ATP8A1Q9Y2Q0 1164 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 TLR3O15455 904 aaKnown RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 STRNO43815 780 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 MCF2P10911 925 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 NR1D1P20393 614 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 BRD2P25440 801 aaKnown RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 GCLCP48506 637 aaPredicted RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 DNAJC21Q5F1R6 531 aaKnown RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 SCARA5Q6ZMJ2 495 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 IFNLR1Q8IU57 520 aaPredicted RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 XYLT2Q9H1B5 865 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.65■□□□□ 0.26
MKS1-204ENST00000537529 CEP83Q9Y592 693 aa16.65■□□□□ 0.26
MKS1-204ENST00000537529 MCM3APO60318 1980 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 CCL15-CCL14A0A0B4J2E2 113 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 CXCL8P10145 99 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 ASPAP45381 313 aa16.64■□□□□ 0.25
MKS1-204ENST00000537529 IRAK1P51617 712 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms