RNA–Protein interactions for RNA: ENST00000537296.5

LDHA-215, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 1,511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-215	ENST00000537296	BRSK2	Q8IWQ3	736 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	CD302	Q8IX05	232 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	KREMEN2	Q8NCW0	462 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	ZNF707	Q96C28	371 aa	Predicted RBP	11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	PHF7	Q9BWX1	381 aa	Predicted RBP	11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	ASB7	Q9H672	318 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	AGPAT3	Q9NRZ7	376 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	HSPBP1	Q9NZL4	362 aa		11.75	□□□□□ -0.53
LDHA-215	ENST00000537296	MYO10	Q9HD67	2058 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	NOTCH4	Q99466	2003 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	ANO9	A1A5B4	782 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296		M0QZQ0	153 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	PIR	O00625	290 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	TRAPPC3	O43617	180 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	TBC1D4	O60343	1298 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	RPN1	P04843	607 aa	Known RBP	11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	AARS	P49588	968 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	ARPP19	P56211	112 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	DPYD	Q12882	1025 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	SNW1	Q13573	536 aa	Known RBP	11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	MRPL58	Q14197	206 aa	Known RBP	11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	BMT2	Q1RMZ1	405 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	STXBP4	Q6ZWJ1	553 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	GPR149	Q86SP6	731 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	FMR1NB	Q8N0W7	255 aa	Predicted RBP	11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	GPD1L	Q8N335	351 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	BEST2	Q8NFU1	509 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	SCUBE2	Q9NQ36	999 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	EXOC1	Q9NV70	894 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	DPP3	Q9NY33	737 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	USP25	Q9UHP3	1055 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	FBXL5	Q9UKA1	691 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	FBXW11	Q9UKB1	542 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	DERA	Q9Y315	318 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	C2CD2	Q9Y426	696 aa		11.74	□□□□□ -0.53
LDHA-215	ENST00000537296	DOCK8	Q8NF50	2099 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	SYN3	O14994	580 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	CYP2J2	P51589	502 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	CDR1	P51861	262 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	LILRA4	P59901	499 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	ROR1	Q01973	937 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	CREM	Q03060	361 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	RAB33A	Q14088	237 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	SLC8B1	Q6J4K2	584 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	ANKS3	Q6ZW76	656 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	RNF135	Q8IUD6	432 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	PLPP6	Q8IY26	295 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	C1orf127	Q8N9H9	656 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	RDH13	Q8NBN7	331 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	ENGASE	Q8NFI3	743 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	CXorf38	Q8TB03	319 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	ERCC4	Q92889	916 aa	Predicted RBP	11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	MUTYH	Q9UIF7	546 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	BACE2	Q9Y5Z0	518 aa		11.73	□□□□□ -0.53
LDHA-215	ENST00000537296	UBE4B	O95155	1302 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	WDR27	A2RRH5	827 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	C2CD4D	B7Z1M9	353 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	XPOT	O43592	962 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	N4BP1	O75113	896 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	GADD45B	O75293	160 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	ZMYND10	O75800	440 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	IL18RAP	O95256	599 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	LDHA	P00338	332 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	C8A	P07357	584 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	OR4Q2	P0C623	313 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	MTHFR	P42898	656 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	TFAM	Q00059	246 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	PNOC	Q13519	176 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	KNOP1	Q1ED39	458 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	CTXN3	Q4LDR2	81 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	ATAT1	Q5SQI0	421 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	PDXDC1	Q6P996	788 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	DSTYK	Q6XUX3	929 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	CMAS	Q8NFW8	434 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	OR5B17	Q8NGF7	314 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	SLC7A14	Q8TBB6	771 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	BORCS6	Q96GS4	357 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	SENP8	Q96LD8	212 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	RIPOR3	Q96MK2	946 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	TSPAN18	Q96SJ8	248 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	POP1	Q99575	1024 aa	Known RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	MTMR12	Q9C0I1	747 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	GZF1	Q9H116	711 aa	Predicted RBP	11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	PLEKHA4	Q9H4M7	779 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	MAPK8IP1	Q9UQF2	711 aa		11.72	□□□□□ -0.53
LDHA-215	ENST00000537296	CCL16	O15467	120 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	SEC24A	O95486	1093 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	ITGB3	P05106	788 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	POLR2B	P30876	1174 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	NTHL1	P78549	312 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	POU5F1	Q01860	360 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	SNRNP35	Q16560	246 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	C15orf39	Q6ZRI6	1047 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	PLEKHO2	Q8TD55	490 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	KCNV2	Q8TDN2	545 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	SMG7	Q92540	1137 aa	Known RBP	11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	TMEM209	Q96SK2	561 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	KCTD10	Q9H3F6	313 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	C11orf16	Q9NQ32	467 aa		11.71	□□□□□ -0.53
LDHA-215	ENST00000537296	SIX4	Q9UIU6	781 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms