RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.41■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LACTBL1A8MY62 500 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 K7ENM7 598 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 BMP15O95972 392 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 FCARP24071 287 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 CCR2P41597 374 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 FAM78AQ5JUQ0 283 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 USP37Q86T82 979 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 MAML2Q8IZL2 1156 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 HS6ST3Q8IZP7 471 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 LEMD2Q8NC56 503 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 RASSF8Q8NHQ8 419 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TSPAN18Q96SJ8 248 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 RPF1Q9H9Y2 349 aaKnown RBP21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 PARVGQ9HBI0 331 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 HEBP1Q9NRV9 189 aa21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 TIMM13Q9Y5L4 95 aaPredicted RBP21.4■■□□□ 1.02
TNFRSF1B-204ENST00000536782 OGTO15294 1046 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NCAM2O15394 837 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LAMTOR5O43504 91 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TRAK2O60296 914 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PIGRP01833 764 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 KRT18P05783 430 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LONP1P36776 959 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 AARSP49588 968 aaKnown RBP eCLIP21.39■■□□□ 1.014e-6■■■■■ 30.6
TNFRSF1B-204ENST00000536782 ZNF131P52739 623 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FOXK2Q01167 660 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ENOX2Q16206 610 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZNF528Q3MIS6 628 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DSTYKQ6XUX3 929 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZNF852Q6ZMS4 543 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 BEST2Q8NFU1 509 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LRRC15Q8TF66 581 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DNASE1L2Q92874 299 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ASB16Q96NS5 453 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TRMT61BQ9BVS5 477 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 BRD9Q9H8M2 597 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ASAH2Q9NR71 780 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 BLOC1S4Q9NUP1 217 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FBXO4Q9UKT5 387 aa21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MRPS17Q9Y2R5 130 aaKnown RBP21.39■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FAM189A1O60320 539 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MYL4P12829 197 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PLCG1P19174 1290 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GRM2Q14416 872 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MCM6Q14566 821 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 BRAPQ7Z569 592 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 RAD54LQ92698 747 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SMARCD2Q92925 531 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CLDN23Q96B33 292 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MSTO1Q9BUK6 570 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZHX3Q9H4I2 956 aa21.38■■□□□ 1.01
TNFRSF1B-204ENST00000536782 A0A0B4J269 797 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 OR6C75A6NL08 312 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TBCAO75347 108 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ADRB2P07550 413 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 OR4Q2P0C623 313 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TARSP26639 723 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ABCD1P33897 745 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ID4P47928 161 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GUCY2FP51841 1108 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 EPHA5P54756 1037 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PLD1Q13393 1074 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 KARSQ15046 597 aaKnown RBP21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CD302Q8IX05 232 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 IRF7Q92985 503 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 FAM212AQ96EL1 285 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 ZSWIM3Q96MP5 696 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PGLYRP2Q96PD5 576 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 YIPF1Q9Y548 306 aa21.37■■□□□ 1.01
TNFRSF1B-204ENST00000536782 COL4A2P08572 1712 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NRG2O14511 850 aaPredicted RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 KINO60870 393 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MOSPD3O75425 235 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PSMC3P17980 439 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TYMPP19971 482 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 RPS9P46781 194 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GTF2BQ00403 316 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CSTF1Q05048 431 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GRIN1Q05586 938 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GPR17Q13304 367 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SF3A1Q15459 793 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SPATA1Q5VX52 437 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 OVOS1Q6IE37 1185 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 BORCS6Q96GS4 357 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 HINFPQ9BQA5 517 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GPR88Q9GZN0 384 aa21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 CPSF3Q9UKF6 684 aaKnown RBP21.36■■□□□ 1.01
TNFRSF1B-204ENST00000536782 MAN2B1O00754 1011 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 VNN2O95498 520 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 GJA1P17302 382 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 PAX3P23760 479 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 NMT1P30419 496 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 EPHB3P54753 998 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 LILRA4P59901 499 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 DUSP4Q13115 394 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 TEAD2Q15562 447 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 JADE1Q6IE81 842 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 SLC39A4Q6P5W5 647 aa21.35■■□□□ 1.01
TNFRSF1B-204ENST00000536782 VITQ6UXI7 678 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms