RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 PIK3C3Q8NEB9 887 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 OR14K1Q8NGZ2 314 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 TTC8Q8TAM2 541 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 RGMAQ96B86 450 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 RPL10LQ96L21 214 aaKnown RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 SLC2A13Q96QE2 648 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 PRAM1Q96QH2 718 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 CDK5RAP1Q96SZ6 601 aaKnown RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 FDXACB1Q9BRP7 624 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 KRTAP4-7Q9BYR0 210 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 TRPM3Q9HCF6 1732 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 PARD6AQ9NPB6 346 aa4.08□□□□□ -1.76
SNHG1-202ENST00000535689 FEZ2Q9UHY8 353 aaPredicted RBP4.08□□□□□ -1.76
SNHG1-202ENST00000535689 ADGRF5Q8IZF2 1346 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 DIRC3C9JPN6 131 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ADCY6O43306 1168 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 MGEA5O60502 916 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 B4GALT3O60512 393 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 GPR32O75388 356 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ITGA10O75578 1167 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 FTLP02792 175 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 AMHP03971 560 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ANXA1P04083 346 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 CELA3BP08861 270 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 NBPF7P0C2Y1 421 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 SPATA31D3P0C874 917 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 CTXN1P60606 82 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 FAM193AP78312 1265 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 MRPL49Q13405 166 aaKnown RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 SAFB2Q14151 953 aaKnown RBP eCLIP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ODF1Q14990 250 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 RNF151Q2KHN1 245 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 VMACQ2NL98 169 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 FKBP15Q5T1M5 1219 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 SPATA31D4Q6ZUB0 917 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 DOK3Q7L591 496 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ZNF572Q7Z3I7 529 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 CHST13Q8NET6 341 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 BRIX1Q8TDN6 353 aaKnown RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 MIEF2Q96C03 454 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 SUCLG2Q96I99 432 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 CLPTM1LQ96KA5 538 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 RTFDC1Q9BY42 306 aaPredicted RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 KIAA1683Q9H0B3 1180 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 ING3Q9NXR8 418 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 FAM30AQ9NZY2 134 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 NOB1Q9ULX3 412 aaKnown RBP4.07□□□□□ -1.76
SNHG1-202ENST00000535689 STXBP5LQ9Y2K9 1186 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 TCAF1Q9Y4C2 921 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 SHANK3Q9BYB0 1731 aa4.07□□□□□ -1.76
SNHG1-202ENST00000535689 GOLGB1Q14789 3259 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ATP10DQ9P241 1426 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 MYBBP1AQ9BQG0 1328 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ADAMTS20P59510 1910 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 UBE2QL1A1L167 161 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 TMEM127O75204 238 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 RAD17O75943 681 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 RECQL4O94761 1208 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CNOT4O95628 575 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 POMCP01189 267 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ATP5JP18859 108 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 DDCP20711 480 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 LPOP22079 712 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CNR2P34972 360 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 SREBF1P36956 1147 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CLRN1P58418 232 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 PURAQ00577 322 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 FGL2Q14314 439 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 GBX1Q14549 363 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 SLC44A4Q53GD3 710 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 DCAF17Q5H9S7 520 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 OTUD7BQ6GQQ9 843 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 EFCAB12Q6NXP0 572 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 DARS2Q6PI48 645 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 LILRA6Q6PI73 481 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 SLC4A10Q6U841 1118 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ABHD15Q6UXT9 468 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 TAX1BP1Q86VP1 789 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 C1QL4Q86Z23 238 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 GRAMD1CQ8IYS0 662 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ZDHHC14Q8IZN3 488 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ADGRG2Q8IZP9 1017 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CCHCR1Q8TD31 782 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 DIS3LQ8TF46 1054 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 KCNC2Q96PR1 638 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 LRRC37BQ96QE4 947 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 RLIMQ9NVW2 624 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 OBP2AQ9NY56 170 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CFAP97Q9P2B7 532 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 HECAQ9UBI9 543 aaPredicted RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 TRPS1Q9UHF7 1281 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 TUBD1Q9UJT1 453 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 IPPQ9Y573 584 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 SLC30A1Q9Y6M5 507 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 COL24A1Q17RW2 1714 aa4.06□□□□□ -1.76
SNHG1-202ENST00000535689 ARHGEF28Q8N1W1 1705 aaKnown RBP4.06□□□□□ -1.76
SNHG1-202ENST00000535689 CCDC7Q96M83 1385 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 FRMPD2Q68DX3 1309 aaPredicted RBP4.05□□□□□ -1.76
SNHG1-202ENST00000535689 WDR17Q8IZU2 1322 aa4.05□□□□□ -1.76
SNHG1-202ENST00000535689 CAPN8A6NHC0 703 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms