RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 STAT4Q14765 748 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 HHATQ5VTY9 493 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 CDAN1Q8IWY9 1227 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 CCDC89Q8N998 374 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 GMCL1P1Q8NEA9 526 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 DENND1AQ8TEH3 1009 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 GRK7Q8WTQ7 553 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 FAM213AQ9BRX8 229 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM121Q9BTD3 319 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 ZCWPW1Q9H0M4 648 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 FBXO6Q9NRD1 293 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 ZFP69BQ9UJL9 534 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 WNK3Q9BYP7 1800 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 UBE4BO95155 1302 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 A6NHS1 94 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 TCP10L2B9ZVM9 353 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 EDF1O60869 148 aaKnown RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 UNGP13051 313 aaPredicted RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 YWHABP31946 246 aaKnown RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 NSFP46459 744 aaKnown RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 NRLP54845 237 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 WNT7BP56706 349 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 DYNLT1P63172 113 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 SP4Q02446 784 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 ACVR2BQ13705 512 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 RNF220Q5VTB9 566 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 NLRP9Q7RTR0 991 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 CCDC125Q86Z20 511 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 CPXCR1Q8N123 301 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 C10orf82Q8WW14 230 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 PPP1R12CQ9BZL4 782 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 STARD13Q9Y3M8 1113 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 KAT6AQ92794 2004 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 MYPNQ86TC9 1320 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 DENND3A2RUS2 1198 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 NFIBO00712 420 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 VIL1P09327 827 aaKnown RBP14.18□□□□□ -0.14
HDAC4-214ENST00000535493 KLRC2P26717 231 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 INHBEP58166 350 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 DGKZQ13574 1117 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM154Q6P9G4 183 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 PHC3Q8NDX5 983 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 ZNF75CPQ92670 426 aaPredicted RBP14.18□□□□□ -0.14
HDAC4-214ENST00000535493 KIFAP3Q92845 792 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 SPATS2LQ9NUQ6 558 aaKnown RBP14.18□□□□□ -0.14
HDAC4-214ENST00000535493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.18□□□□□ -0.14
HDAC4-214ENST00000535493 NRAPQ86VF7 1730 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 KDM4FA0A1W2PPD8 638 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 CLRN2A0PK11 232 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 RGL2O15211 777 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 ZBED4O75132 1171 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 SMIM24O75264 130 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 RFC5P40937 340 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 CPA2P48052 419 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 PDIA2Q13087 525 aaKnown RBP14.18□□□□□ -0.14
HDAC4-214ENST00000535493 MUM1Q2TAK8 710 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 XKR9Q5GH70 373 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 SP8Q8IXZ3 490 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 PTPRN2Q92932 1015 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 ZDHHC15Q96MV8 337 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 DLGAP2Q9P1A6 1054 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 SLC17A7Q9P2U7 560 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 TELO2Q9Y4R8 837 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 LRRC42Q9Y546 428 aa14.18□□□□□ -0.14
HDAC4-214ENST00000535493 ZNFX1Q9P2E3 1918 aaKnown RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 UMODL1Q5DID0 1318 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 STRCQ7RTU9 1775 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 P4HA2O15460 535 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ATP9AO75110 1047 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TCEA3O75764 348 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 KRT36O76013 467 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 SKIV2L2P42285 1042 aaKnown RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 MXRA7P84157 204 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TFDP1Q14186 410 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 SLC39A4Q6P5W5 647 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 MFSD7Q6UXD7 560 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TTC7BQ86TV6 843 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 LDHDQ86WU2 507 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 LRRC6Q86X45 466 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 BSNDQ8WZ55 320 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TLR3O15455 904 aaKnown RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 P4HBP07237 508 aaKnown RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ALDH3A1P30838 453 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 NPTX2P47972 431 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 IRX1P78414 480 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 GTF2BQ00403 316 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 CCNG2Q16589 344 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 PDK4Q16654 411 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 B3GNT9Q6UX72 402 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 AGGF1Q8N302 714 aaeCLIP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ZCCHC9Q8N567 271 aaKnown RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ZNF516Q92618 1163 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 GRAMD1AQ96CP6 724 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 PRMT6Q96LA8 375 aaPredicted RBP14.17□□□□□ -0.14
HDAC4-214ENST00000535493 MXRA8Q9BRK3 442 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM8AQ9HCN3 771 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ARL8BQ9NVJ2 186 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 ARMCX1Q9P291 453 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 KANSL3Q9P2N6 904 aa14.17□□□□□ -0.14
HDAC4-214ENST00000535493 TBX20Q9UMR3 447 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms