RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PTCD3Q96EY7 689 aaKnown RBP6.59□□□□□ -1.35
PRKDC-205ENST00000535375 MAP3K14Q99558 947 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 TLR10Q9BXR5 811 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 CFAP97Q9P2B7 532 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 ZNF180Q9UJW8 692 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 SLC45A2Q9UMX9 530 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 DMTF1Q9Y222 760 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 NEU2Q9Y3R4 380 aa6.59□□□□□ -1.35
PRKDC-205ENST00000535375 TRGV11A0A075B6L2 103 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 OFD1O75665 1012 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 TGM1P22735 817 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 VAV2P52735 878 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 FPGSQ05932 587 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 NOGQ13253 232 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 GEN1Q17RS7 908 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 SH2D3CQ8N5H7 860 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 NACC2Q96BF6 587 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 MVB12AQ96EY5 273 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 KLHL32Q96NJ5 620 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 GTPBP4Q9BZE4 634 aaKnown RBP6.58□□□□□ -1.36
PRKDC-205ENST00000535375 WDCPQ9H6R7 721 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 UNKLQ9H9P5 680 aaKnown RBP6.58□□□□□ -1.36
PRKDC-205ENST00000535375 LMBRD1Q9NUN5 540 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 C11orf21Q9P2W6 132 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 ABCF2Q9UG63 623 aa6.58□□□□□ -1.36
PRKDC-205ENST00000535375 FEZ2Q9UHY8 353 aaPredicted RBP6.58□□□□□ -1.36
PRKDC-205ENST00000535375 GJB1P08034 283 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 KCNA2P16389 499 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 HK3P52790 923 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 EPHB1P54762 984 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 MPP3Q13368 585 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 PIN1Q13526 163 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-205ENST00000535375 PREPLQ4J6C6 727 aaPredicted RBP6.57□□□□□ -1.36
PRKDC-205ENST00000535375 IFIT1BQ5T764 474 aaKnown RBP6.57□□□□□ -1.36
PRKDC-205ENST00000535375 PDSS2Q86YH6 399 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 GRAMD1CQ8IYS0 662 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 SLC44A3Q8N4M1 653 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 PDPRQ8NCN5 879 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 TMIEQ8NEW7 156 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 TNPO1Q92973 898 aaKnown RBP6.57□□□□□ -1.36
PRKDC-205ENST00000535375 SCAMP4Q969E2 229 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 FAM167AQ96KS9 214 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 Q96MF0 132 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 AGAP2Q99490 1192 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 SMOQ99835 787 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 SYBUQ9NX95 663 aa6.57□□□□□ -1.36
PRKDC-205ENST00000535375 NT5C1B-RDH14C9J2C7 533 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 ABLIM3O94929 683 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 ESRRBO95718 433 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 FXR1P51114 621 aaKnown RBP eCLIP6.56□□□□□ -1.362e-6■■■□□ 15.6
PRKDC-205ENST00000535375 RAB27AP51159 221 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 INHBEP58166 350 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 PSMC1P62191 440 aaKnown RBP6.56□□□□□ -1.36
PRKDC-205ENST00000535375 MCL1Q07820 350 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 ERCC6LQ2NKX8 1250 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 CFAP52Q8N1V2 620 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 JPH3Q8WXH2 748 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-205ENST00000535375 LINC00476Q8WZB0 136 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 TMEM125Q96AQ2 219 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 ZG16BQ96DA0 208 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 RLIMQ9NVW2 624 aa6.56□□□□□ -1.36
PRKDC-205ENST00000535375 PNMA8BQ9ULN7 279 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-205ENST00000535375 EPN1Q9Y6I3 576 aaPredicted RBP6.56□□□□□ -1.36
PRKDC-205ENST00000535375 PRAMEF33A0A0G2JMD5 474 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 CCDC195A0A1B0GUA6 201 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 A0A1W2PS29 197 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 ZNF785A8K8V0 405 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 H3BUI4 141 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 TOR1BO14657 336 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 AKAP10O43572 662 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 PRAMEF10O60809 474 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 PRDX5P30044 214 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 PHKA1P46020 1223 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 PIK3CGP48736 1102 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 MAP2K6P52564 334 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 SEC24CP53992 1094 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 RPS7P62081 194 aaKnown RBP6.55□□□□□ -1.36
PRKDC-205ENST00000535375 SMN1Q16637 294 aaKnown RBP6.55□□□□□ -1.36
PRKDC-205ENST00000535375 CRB2Q5IJ48 1285 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 ODR4Q5SWX8 454 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 SP5Q6BEB4 398 aaPredicted RBP6.55□□□□□ -1.36
PRKDC-205ENST00000535375 NSUN7Q8NE18 718 aaKnown RBP6.55□□□□□ -1.36
PRKDC-205ENST00000535375 GPR150Q8NGU9 434 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 SLC9A6Q92581 669 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 HPS3Q969F9 1004 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 FUBP1Q96AE4 644 aaKnown RBP6.55□□□□□ -1.36
PRKDC-205ENST00000535375 TRIB1Q96RU8 372 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 SIK2Q9H0K1 926 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 PNPOQ9NVS9 261 aa6.55□□□□□ -1.36
PRKDC-205ENST00000535375 MAST3O60307 1309 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 POLRMTO00411 1230 aaKnown RBP6.54□□□□□ -1.36
PRKDC-205ENST00000535375 CHEK2O96017 543 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 GNAI2P04899 355 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 PROZP22891 400 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 ZNF135P52742 658 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-205ENST00000535375 POU6F2P78424 691 aaPredicted RBP6.54□□□□□ -1.36
PRKDC-205ENST00000535375 SCAPQ12770 1279 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 PCSK4Q6UW60 755 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 Q6ZNX1 250 aa6.54□□□□□ -1.36
PRKDC-205ENST00000535375 CAMKK1Q8N5S9 505 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms