RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 DMAC2Q9NW81 257 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 ATXN10Q9UBB4 475 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 FBXL5Q9UKA1 691 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 LZTS1Q9Y250 596 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PTPRJQ12913 1337 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 TRAPPC3O43617 180 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 MLH1P40692 756 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 AMPD2Q01433 879 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 PRKCEQ02156 737 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 TMCO4Q5TGY1 634 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 HS2ST1Q7LGA3 356 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 KAT5Q92993 513 aa9.6□□□□□ -0.87
SF3B2-216ENST00000534765 JPH1Q9HDC5 661 aaPredicted RBP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.6□□□□□ -0.87
SF3B2-216ENST00000534765 A0A1W2PQC6 194 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 NVLO15381 856 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ITGBL1O95965 494 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 TCP1P17987 556 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 MARK3P27448 753 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 MARSP56192 900 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ASTE1Q2TB18 679 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 C14orf80Q86SX3 495 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PALB2Q86YC2 1186 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 SIX5Q8N196 739 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ZBTB45Q96K62 511 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PACSIN1Q9BY11 444 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 DDX18Q9NVP1 670 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ARHGEF38Q9NXL2 777 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 KLHL14Q9P2G3 628 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PNMA3Q9UL41 463 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ZMYND8Q9ULU4 1186 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 BICDL2A1A5D9 508 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PDHXO00330 501 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 E2F6O75461 281 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 CSDE1O75534 798 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 NPTX2P47972 431 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PPP3CAQ08209 521 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 SEPT6Q14141 434 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 MAN2A1Q16706 1144 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 CRELD2Q6UXH1 353 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 TMEM161BQ8NDZ6 487 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 LMO3Q8TAP4 145 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ASAP3Q8TDY4 903 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 KATNBL1Q9H079 304 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 FGFR1OP2Q9NVK5 253 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 FLRT1Q9NZU1 646 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 TDRKHQ9Y2W6 561 aaKnown RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 IGSF9BQ9UPX0 1349 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ZFXP17010 805 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 DNM2P50570 870 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ERVK-9P63128 1117 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 GFPT1Q06210 699 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 DCAF17Q5H9S7 520 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 C4orf19Q8IY42 314 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 CCT6BQ92526 530 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 NHEJ1Q9H9Q4 299 aaPredicted RBP9.59□□□□□ -0.87
SF3B2-216ENST00000534765 PFDN4Q9NQP4 134 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 SLC9A2Q9UBY0 812 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 AGAP1Q9UPQ3 857 aa9.59□□□□□ -0.87
SF3B2-216ENST00000534765 ATXN2Q99700 1313 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ARHGEF35A5YM69 484 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 KCNK3O14649 394 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ATG7O95352 703 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 IQCF3P0C7M6 154 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 NAT1P18440 290 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 PON1P27169 355 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 BPIFB4P59827 614 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 BTKQ06187 659 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 XKR9Q5GH70 373 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 FAM102BQ5T8I3 360 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 FAM178BQ8IXR5 827 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ZC3H15Q8WU90 426 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 WDR60Q8WVS4 1066 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 P3H4Q92791 437 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 DNAJC1Q96KC8 554 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 SNX12Q9UMY4 172 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CTDP1Q9Y5B0 961 aaPredicted RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 IGKV6D-21A0A0A0MT36 114 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 DCDC2CA8MYV0 355 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 K7ENM7 598 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 FAM13AO94988 1023 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 PYGMP11217 842 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 GALK1P51570 392 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 SPAG1Q07617 926 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 HIC1Q14526 733 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 MTERF2Q49AM1 385 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 SFMBT2Q5VUG0 894 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 RRAGAQ7L523 313 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CBWD2Q8IUF1 395 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 MCUR1Q96AQ8 359 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 GPRASP2Q96D09 838 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 SMC6Q96SB8 1091 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 LSM14BQ9BX40 385 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 CXCL16Q9H2A7 254 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 PCDHA10Q9Y5I2 948 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ANK1P16157 1881 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ZC3H4Q9UPT8 1303 aaKnown RBP9.58□□□□□ -0.88
SF3B2-216ENST00000534765 ANKRD62A6NC57 917 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 TRIM43BA6NCK2 446 aa9.58□□□□□ -0.88
SF3B2-216ENST00000534765 WDR64B1ANS9 1081 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms