RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 TWISTNBQ3B726 338 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 LACTB2Q53H82 288 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 HSP90AB2PQ58FF8 381 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF569Q5MCW4 686 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CATSPEREQ5SY80 951 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 EMC10Q5UCC4 262 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 TCERG1LQ5VWI1 586 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NUGGCQ68CJ6 796 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NCAPH2Q6IBW4 605 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 OGFOD2Q6N063 350 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CCDC62Q6P9F0 684 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 PGM2L1Q6PCE3 622 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 MTHFD1LQ6UB35 978 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 LIPIQ6XZB0 460 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 G2E3Q7L622 706 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ARHGAP22Q7Z5H3 698 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 FAM124AQ86V42 546 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 RASSF3Q86WH2 238 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 MYLK4Q86YV6 388 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CILP2Q8IUL8 1156 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 IFNL2Q8IZJ0 200 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CNTD1Q8N815 330 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF610Q8N9Z0 462 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 TRIM58Q8NG06 486 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 AENQ8WTP8 325 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 HOOK2Q96ED9 719 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 RRP36Q96EU6 259 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 TCEANC2Q96MN5 208 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ZNF396Q96N95 335 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SCLT1Q96NL6 688 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 FMNL2Q96PY5 1086 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 USP28Q96RU2 1077 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 TSPAN18Q96SJ8 248 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GORASP1Q9BQQ3 440 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 CRACR2AQ9BSW2 395 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 FAM126AQ9BYI3 521 aaPredicted RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 ANO3Q9BYT9 981 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 YIPF3Q9GZM5 350 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 PUS7LQ9H0K6 701 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 IRF2BPLQ9H1B7 796 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NDST4Q9H3R1 872 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NOD2Q9HC29 1040 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 KCNMB3Q9NPA1 279 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 BATF3Q9NR55 127 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 AASDHPPTQ9NRN7 309 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 C14orf119Q9NWQ9 140 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 MKS1Q9NXB0 559 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GALNT8Q9NY28 637 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6AQ9NYA3 693 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 RGL1Q9NZL6 768 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 USP36Q9P275 1121 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 TCEAL9Q9UHQ7 104 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 GGA2Q9UJY4 613 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 FAM184BQ9ULE4 1060 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 USP18Q9UMW8 372 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SMG5Q9UPR3 1016 aaKnown RBP3.5□□□□□ -1.85
CSDE1-216ENST00000534389 C15orf41Q9Y2V0 281 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 RIPOR2Q9Y4F9 1068 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 RAPGEF6Q8TEU7 1601 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 VWDEQ8N2E2 1590 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NEURL4Q96JN8 1562 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 SPHKAPQ2M3C7 1700 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 NSD2O96028 1365 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 PNPLA6Q8IY17 1366 aa3.5□□□□□ -1.85
CSDE1-216ENST00000534389 LRRC7Q96NW7 1537 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYO3AQ8NEV4 1616 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 GPR75-ASB3A0A0A6YYF3 556 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SHTN1A0MZ66 631 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 DPPA5A6NC42 116 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FAM83GA6ND36 823 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PLEKHD1A6NEE1 506 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 GOLGA6L9A6NEM1 432 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 EIF4E1BA6NMX2 242 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 DDX3XO00571 662 aaKnown RBP eCLIP3.49□□□□□ -1.851e-6■■□□□ 13.3
CSDE1-216ENST00000534389 NDUFAB1O14561 156 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 DVL2O14641 736 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 XPOTO43592 962 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CDKL5O76039 1030 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 KIAA0754O94854 1291 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PCDH8O95206 1070 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CTDNEP1O95476 244 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ATP6V1G2O95670 118 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MT-CO1P00395 513 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 CFBP00751 764 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MYBL1P10243 752 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 EPB41P11171 864 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 EZRP15311 586 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FERP16591 822 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 FBLN1P23142 703 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 PRKAR2BP31323 418 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 MEOX1P50221 254 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 NDUFA8P51970 172 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 BCAR1P56945 870 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 UBASH3AP57075 661 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 LINC00310P59036 64 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 SMAD3P84022 425 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ATP8B2P98198 1209 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ROR2Q01974 943 aaKnown RBP3.49□□□□□ -1.85
CSDE1-216ENST00000534389 NFATC3Q12968 1075 aa3.49□□□□□ -1.85
CSDE1-216ENST00000534389 ADAM9Q13443 819 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms