RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 GJB1P08034 283 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 GNALP38405 381 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 FAM189BP81408 668 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 SLFN5Q08AF3 891 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 CCDC181Q5TID7 509 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 SPRED1Q7Z699 444 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 FAM156AQ8NDB6 213 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 TMIEQ8NEW7 156 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 BRIX1Q8TDN6 353 aaKnown RBP8.07□□□□□ -1.12
CASP4-213ENST00000534356 SH3RF3Q8TEJ3 882 aaPredicted RBP8.07□□□□□ -1.12
CASP4-213ENST00000534356 MARS2Q96GW9 593 aaKnown RBP8.07□□□□□ -1.12
CASP4-213ENST00000534356 CCDC136Q96JN2 1154 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 KLHL32Q96NJ5 620 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 ZMAT3Q9HA38 289 aaKnown RBP8.07□□□□□ -1.12
CASP4-213ENST00000534356 PARPBPQ9NWS1 579 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 ATP11BQ9Y2G3 1177 aa8.07□□□□□ -1.12
CASP4-213ENST00000534356 C1QTNF3-AMACRE9PGA6 284 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 PRRG2O14669 202 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 RPS6KA4O75676 772 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 ADRB1P08588 477 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 C1SP09871 688 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 FCER1AP12319 257 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 HDCP19113 662 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 KRTAP10-2P60368 255 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 PSMC1P62191 440 aaKnown RBP8.06□□□□□ -1.12
CASP4-213ENST00000534356 GPSM2P81274 684 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 KIF22Q14807 665 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 CNN3Q15417 329 aaKnown RBP8.06□□□□□ -1.12
CASP4-213ENST00000534356 KHDC1LQ5JSQ8 128 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 MAEAQ7L5Y9 396 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 SRGAP1Q7Z6B7 1085 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 NUP133Q8WUM0 1156 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 GPR20Q99678 358 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 ZSWIM1Q9BR11 485 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 TLR10Q9BXR5 811 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 REXO4Q9GZR2 422 aaKnown RBP8.06□□□□□ -1.12
CASP4-213ENST00000534356 ATP6V0A4Q9HBG4 840 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 SARS2Q9NP81 518 aaKnown RBP8.06□□□□□ -1.12
CASP4-213ENST00000534356 CFAP97Q9P2B7 532 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 ZDHHC8Q9ULC8 765 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 SNAPC4Q5SXM2 1469 aa8.06□□□□□ -1.12
CASP4-213ENST00000534356 NCANO14594 1321 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 SOGA1O94964 1423 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 ZBED1O96006 694 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 HRGP04196 525 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
CASP4-213ENST00000534356 CCDC149Q6ZUS6 474 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 PDSS2Q86YH6 399 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 AOPEPQ8N6M6 819 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 SLC17A8Q8NDX2 589 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 PLEKHG4BQ96PX9 1271 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 IMPG2Q9BZV3 1241 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 RLIMQ9NVW2 624 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 USP25Q9UHP3 1055 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 AATKQ6ZMQ8 1374 aa8.05□□□□□ -1.12
CASP4-213ENST00000534356 CLASP1Q7Z460 1538 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 A0A1B0GTW7 788 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 ZNF785A8K8V0 405 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 PRC1O43663 620 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 ANXA1P04083 346 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 ELANEP08246 267 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 RHCEP18577 417 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 NR4A1P22736 598 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 BUD31P41223 144 aaPredicted RBP8.04□□□□□ -1.12
CASP4-213ENST00000534356 SOX8P57073 446 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 TBX4P57082 545 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 DGCR2P98153 550 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 RHDQ02161 417 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 LRRC55Q6ZSA7 311 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 MRGPRX1Q96LB2 322 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 SLC46A2Q9BY10 475 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.04□□□□□ -1.12
CASP4-213ENST00000534356 HSFX1Q9UBD0 423 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 ERCC6L2Q5T890 1561 aa8.04□□□□□ -1.12
CASP4-213ENST00000534356 E9PLN8 166 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 NCR1O76036 304 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 SPATA31D3P0C874 917 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 RARBP10826 455 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 FGFR4P22455 802 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 HSD11B2P80365 405 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 OCA2Q04671 838 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 KIAA0753Q2KHM9 967 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 EMC10Q5UCC4 262 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 SPATA31D4Q6ZUB0 917 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 FAM43AQ8N2R8 423 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 ZNF276Q8N554 614 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 PDPRQ8NCN5 879 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 CACTINQ8WUQ7 758 aaKnown RBP8.03□□□□□ -1.12
CASP4-213ENST00000534356 SCAMP4Q969E2 229 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 VKORC1Q9BQB6 163 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 BHMT2Q9H2M3 363 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 RNPEPQ9H4A4 650 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 GPR35Q9HC97 309 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 VSX1Q9NZR4 365 aaPredicted RBP8.03□□□□□ -1.12
CASP4-213ENST00000534356 AGAP1Q9UPQ3 857 aa8.03□□□□□ -1.12
CASP4-213ENST00000534356 A0A1W2PPL8 197 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 CFAP69A5D8W1 941 aa8.02□□□□□ -1.13
CASP4-213ENST00000534356 KITP10721 976 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms