RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 OAS1P00973 400 aaKnown RBP20.5■□□□□ 0.87
CAPN1-226ENST00000533820 MAPTP10636 758 aaKnown RBP20.5■□□□□ 0.87
CAPN1-226ENST00000533820 UNGP13051 313 aaPredicted RBP20.5■□□□□ 0.87
CAPN1-226ENST00000533820 ATP5DP30049 168 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 MAP4K3Q8IVH8 894 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 OGFOD1Q8N543 542 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 MAB21L3Q8N8X9 362 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 KCNV2Q8TDN2 545 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 FAM151AQ8WW52 585 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 PITPNM3Q9BZ71 974 aa20.5■□□□□ 0.87
CAPN1-226ENST00000533820 LTBP4Q8N2S1 1624 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 BANF1O75531 89 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 C10orf88Q9H8K7 445 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 ADAM22Q9P0K1 906 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 KLHL14Q9P2G3 628 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF148Q9UQR1 794 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 CTDP1Q9Y5B0 961 aaPredicted RBP20.49■□□□□ 0.87
CAPN1-226ENST00000533820 DIAPH2O60879 1101 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 IFNB1P01574 187 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 TMEM63BQ5T3F8 832 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 SLC17A8Q8NDX2 589 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 GRK7Q8WTQ7 553 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 FNBP1Q96RU3 617 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 COQ4Q9Y3A0 265 aa20.49■□□□□ 0.87
CAPN1-226ENST00000533820 EXOC1LA0A1B0GW35 172 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 FDX1P10109 184 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 PIK3CAP42336 1068 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 EZH1Q92800 747 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-226ENST00000533820 TMEM237Q96Q45 408 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 QTRT2Q9H974 415 aaKnown RBP20.48■□□□□ 0.87
CAPN1-226ENST00000533820 PCDHB4Q9Y5E5 795 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 WDR64B1ANS9 1081 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF862O60290 1169 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 KRT15P19012 456 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 PTGER2P43116 358 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 MAGEA4P43358 317 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 PLCB3Q01970 1234 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 RNASELQ05823 741 aaKnown RBP20.48■□□□□ 0.87
CAPN1-226ENST00000533820 PGM5Q15124 567 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 HHATQ5VTY9 493 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 ARHGEF16Q5VV41 709 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 SWSAP1Q6NVH7 229 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 MIS18BP1Q6P0N0 1132 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 ECHDC2Q86YB7 292 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 C4orf19Q8IY42 314 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 GPD1LQ8N335 351 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 B4GALNT2Q8NHY0 566 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 ZBTB45Q96K62 511 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-226ENST00000533820 VPS37BQ9H9H4 285 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 ETNK1Q9HBU6 452 aa20.48■□□□□ 0.87
CAPN1-226ENST00000533820 CFAP73A6NFT4 308 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 CDH16O75309 829 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 HLA-DRAP01903 254 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 WDR4P57081 412 aaKnown RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 RPL7AP62424 266 aaKnown RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 BNIP1Q12981 228 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF394Q53GI3 561 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 WDR44Q5JSH3 913 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 PCNX4Q63HM2 1172 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 KRT27Q7Z3Y8 459 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 ERICH1Q86X53 443 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 TBC1D22BQ9NU19 505 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 CHCHD3Q9NX63 227 aaKnown RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 SEPT9Q9UHD8 586 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 DNPEPQ9ULA0 475 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 PTPRJQ12913 1337 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 TLR3O15455 904 aaKnown RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 BRDTQ58F21 947 aaPredicted RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 ANKFY1Q9P2R3 1169 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 CNTNAP1P78357 1384 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 UMODL1Q5DID0 1318 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 TAC1P20366 129 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 FKBP1AP62942 108 aaKnown RBP20.47■□□□□ 0.87
CAPN1-226ENST00000533820 ZBTB41Q5SVQ8 909 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 ARHGEF18Q6ZSZ5 1173 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 WNK4Q96J92 1243 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 MFSD14AQ96MC6 490 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 CCDC77Q9BR77 488 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 PCDHB2Q9Y5E7 798 aa20.47■□□□□ 0.87
CAPN1-226ENST00000533820 PROSCO94903 275 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 NLRP11P59045 1033 aaKnown RBP20.46■□□□□ 0.87
CAPN1-226ENST00000533820 SLC30A9Q6PML9 568 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 A0A1B0GVG6 124 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 WDR91A4D1P6 747 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 LIG4P49917 911 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 PKN2Q16513 984 aaKnown RBP20.46■□□□□ 0.87
CAPN1-226ENST00000533820 GALNTL6Q49A17 601 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 MTERF2Q49AM1 385 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF449Q6P9G9 518 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 VSIG1Q86XK7 387 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 ANKMY2Q8IV38 441 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 CCDC89Q8N998 374 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 ANKLE1Q8NAG6 615 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 SLCO2A1Q92959 643 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 FAM167BQ9BTA0 163 aa20.46■□□□□ 0.87
CAPN1-226ENST00000533820 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-226ENST00000533820 SAE1Q9UBE0 346 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-226ENST00000533820 COL11A2P13942 1736 aaPredicted RBP20.46■□□□□ 0.87
CAPN1-226ENST00000533820 RTN3O95197 1032 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-226ENST00000533820 MSH2P43246 934 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms