RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 ITGB3P05106 788 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 APRTP07741 180 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 OCM2P0CE71 109 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 OCMP0CE72 109 aaPredicted RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 FXR2P51116 673 aaKnown RBP eCLIP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 CLCN3P51790 818 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 DPYDQ12882 1025 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 PDAP1Q13442 181 aaKnown RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 NCAPHQ15003 741 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC18A3Q16572 532 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 AMHR2Q16671 573 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 UGP2Q16851 508 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 GOLGA7BQ2TAP0 167 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 HIBCHQ6NVY1 386 aaPredicted RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 MRPS31Q92665 395 aaKnown RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 KRT35Q92764 455 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 NRBF2Q96F24 287 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 MKNK1Q9BUB5 465 aa6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 POLR3CQ9BUI4 534 aaPredicted RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 TAF1DQ9H5J8 278 aaPredicted RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 ACTR5Q9H9F9 607 aaPredicted RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 XAB2Q9HCS7 855 aaKnown RBP6.71□□□□□ -1.34
UBQLN1-206ENST00000533705 SPHKAPQ2M3C7 1700 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MANSC4A6NHS7 340 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CKMP06732 381 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GALCP54803 685 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MAGOHP61326 146 aaKnown RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 RRM2BQ7LG56 351 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 HS6ST3Q8IZP7 471 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PIP4K2CQ8TBX8 421 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PPP1R2P1Q96PQ5 205 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 KIFC3Q9BVG8 833 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TEKT2Q9UIF3 430 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CAPN15O75808 1086 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 DNAJB2P25686 324 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 HMOX2P30519 316 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MAP2K2P36507 400 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ATP6V1E1P36543 226 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 RFX5P48382 616 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TMEM259Q4ZIN3 620 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GPAT2Q6NUI2 795 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TRAPPC11Q7Z392 1133 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MTBPQ96DY7 904 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 NR1H4Q96RI1 486 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TMEM117Q9H0C3 514 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 UNC45AQ9H3U1 944 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 EML4Q9HC35 981 aaKnown RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MLXIPLQ9NP71 852 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 HDAC6Q9UBN7 1215 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CDC42BPAQ5VT25 1732 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 NEXMIFQ5QGS0 1516 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MSH4O15457 936 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 P4HA2O15460 535 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 RPLP2P05387 115 aaKnown RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PYGLP06737 847 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PDIA6Q15084 440 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PDK1Q15118 436 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SEZ6Q53EL9 994 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CATSPER3Q86XQ3 398 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC25A41Q8N5S1 370 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SLC35G2Q8TBE7 412 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 UCMAQ8WVF2 138 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TSPAN17Q96FV3 270 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CLMNQ96JQ2 1002 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 CYTH2Q99418 400 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GPR63Q9BZJ6 419 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ARHGEF38Q9NXL2 777 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SPAG7O75391 227 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 VTNP04004 478 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ARFIP2P53365 341 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PTPRN2Q92932 1015 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ANLNQ9NQW6 1124 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TMEM39AQ9NV64 488 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 DPP3Q9NY33 737 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ZFP69BQ9UJL9 534 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 DCTN4Q9UJW0 460 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SSU72P8A0A1W2PR75 194 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SPDYE5A6NIY4 337 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 HAUS5O94927 633 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MBL2P11226 248 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 VCAM1P19320 739 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GPD1P21695 349 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 GTF2H1P32780 548 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SPDYE7PQ495Y7 208 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TEDDM1Q5T9Z0 273 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SYDE1Q6ZW31 735 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ANKMY2Q8IV38 441 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 TRIM48Q8IWZ4 208 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 ARHGEF26Q96DR7 871 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 OTUB1Q96FW1 271 aaPredicted RBP6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 PI4K2AQ9BTU6 479 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 NEUROG2Q9H2A3 272 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 SENP2Q9HC62 589 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 AMACRQ9UHK6 382 aa6.7□□□□□ -1.34
UBQLN1-206ENST00000533705 MAD2L2Q9UI95 211 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms