RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 GCLMP48507 274 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 GLUD2P49448 558 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 MYL5Q02045 173 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 BIRC3Q13489 604 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 TRPC3Q13507 836 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 TCERG1LQ5VWI1 586 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 KRT39Q6A163 491 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 KIAA1841Q6NSI8 718 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 PDXDC1Q6P996 788 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 MRPL43Q8N983 215 aaKnown RBP17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 MICAL1Q8TDZ2 1067 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 SENP8Q96LD8 212 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 CNOT6LQ96LI5 555 aaKnown RBP17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 MRPL17Q9NRX2 175 aaKnown RBP17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 PCDHB8Q9UN66 801 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 NFE2L3Q9Y4A8 694 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 SZT2Q5T011 3432 aa17.72■□□□□ 0.43
PACSIN3-210ENST00000533686 I3L4J1 428 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 VNN1O95497 513 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 CAVIN2O95810 425 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 TYMPP19971 482 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 IGFBP4P22692 258 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 NCOA4Q13772 614 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 PTPN14Q15678 1187 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 DCAF17Q5H9S7 520 aaPredicted RBP17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 SCARA3Q6AZY7 606 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 DSTYKQ6XUX3 929 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 APPL2Q8NEU8 664 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 PIK3R5Q8WYR1 880 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 HPDLQ96IR7 371 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 VRTNQ9H8Y1 702 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 GDAP2Q9NXN4 497 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 PLXNA4Q9HCM2 1894 aa17.71■□□□□ 0.43
PACSIN3-210ENST00000533686 C2orf71A6NGG8 1288 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 FOSL2P15408 326 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 TKTP29401 623 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 MXI1P50539 228 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 MYL6P60660 151 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 MRPL58Q14197 206 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 SGSM1Q2NKQ1 1148 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 RTP2Q5QGT7 225 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 PLPP4Q5VZY2 271 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 CEP57Q86XR8 500 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 RIN2Q8WYP3 895 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 TAF4BQ92750 862 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 PPP2R3CQ969Q6 453 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 XYLT2Q9H1B5 865 aa17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 NSUN3Q9H649 340 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 SAMSN1Q9NSI8 373 aaKnown RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 MAGEC2Q9UBF1 373 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 COL4A4P53420 1690 aaPredicted RBP17.7■□□□□ 0.42
PACSIN3-210ENST00000533686 CDH23Q9H251 3354 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 SMTNL1A8MU46 457 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 CYB561D2O14569 222 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 P4HA2O15460 535 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 N4BP1O75113 896 aaKnown RBP17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 HLA-DRAP01903 254 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 CYP11A1P05108 521 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 ODC1P11926 461 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 EEF1GP26641 437 aaKnown RBP17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 FMO5P49326 533 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 ZNF165P49910 485 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 CREMQ03060 361 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 NCAPHQ15003 741 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 CDKAL1Q5VV42 579 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 ANKS3Q6ZW76 656 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 DPH6Q7L8W6 267 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 LNX1Q8TBB1 728 aaPredicted RBP17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 AUTS2Q8WXX7 1259 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 B3GALT6Q96L58 329 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 MMRN2Q9H8L6 949 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 FNIP2Q9P278 1114 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 DSEQ9UL01 958 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 COQ4Q9Y3A0 265 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 BACE2Q9Y5Z0 518 aa17.69■□□□□ 0.42
PACSIN3-210ENST00000533686 TRANK1O15050 2925 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 HIDE1A8MVS5 230 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 H7C4K7 107 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 OAZ2O95190 189 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 AFPP02771 609 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 FAM163BP0C2L3 166 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 PIK3CAP42336 1068 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 MTIF2P46199 727 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 CBWD6Q4V339 395 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 CBWD3Q5JTY5 395 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 CBWD5Q5RIA9 395 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 VARS2Q5ST30 1063 aaKnown RBP17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 LIMS2Q7Z4I7 341 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 TOP6BLQ8N6T0 577 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 FBXL13Q8NEE6 735 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 SPATA18Q8TC71 538 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 TAS1R2Q8TE23 839 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 CDCA3Q99618 268 aaPredicted RBP17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 EMILIN2Q9BXX0 1053 aa17.68■□□□□ 0.42
PACSIN3-210ENST00000533686 OXCT2Q9BYC2 517 aaPredicted RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms