RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 FGFR3P22607 806 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 GCLMP48507 274 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 CCDC40Q4G0X9 1142 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 USP37Q86T82 979 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 VPS52Q8N1B4 723 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 CNOT6LQ96LI5 555 aaKnown RBP13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 CDX2Q99626 313 aaPredicted RBP13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 PUF60Q9UHX1 559 aaKnown RBP13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 SZT2Q5T011 3432 aa13.71□□□□□ -0.21
RPUSD4-208ENST00000533628 SF3B1O75533 1304 aaKnown RBP eCLIP13.71□□□□□ -0.22
RPUSD4-208ENST00000533628 VWA8A3KMH1 1905 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 CTSAP10619 480 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 PAX3P23760 479 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 IQCB1Q15051 598 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 KIAA0319Q5VV43 1072 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 DHX40Q8IX18 779 aaKnown RBP13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 MRPL38Q96DV4 380 aaKnown RBP13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 ARID3AQ99856 593 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 XYLT2Q9H1B5 865 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 TMEM8AQ9HCN3 771 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 TLR9Q9NR96 1032 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 LMCD1Q9NZU5 365 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 STK39Q9UEW8 545 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 CDH23Q9H251 3354 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 STAU1O95793 577 aaKnown RBP13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 TAF6P49848 677 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 MYL6P60660 151 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 MYL5Q02045 173 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 DSG1Q02413 1049 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 ELAVL2Q12926 359 aaKnown RBP13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 FAM171A1Q5VUB5 890 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 GPR65Q8IYL9 337 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 B3GALT6Q96L58 329 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 FANCLQ9NW38 375 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 NUB1Q9Y5A7 615 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 MTCH2Q9Y6C9 303 aa13.7□□□□□ -0.22
RPUSD4-208ENST00000533628 PMM2O15305 246 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 LRRN2O75325 713 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 KRT19P08727 400 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF18P17022 549 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 TKTP29401 623 aaKnown RBP13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 PNPLA4P41247 253 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 TPD52L1Q16890 204 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 RTP2Q5QGT7 225 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 LIMS2Q7Z4I7 341 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 TAS1R2Q8TE23 839 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 MYLIPQ8WY64 445 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 SENP8Q96LD8 212 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF560Q96MR9 790 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF830Q96NB3 372 aaPredicted RBP13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 TCF25Q9BQ70 676 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 NAT10Q9H0A0 1025 aaKnown RBP13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 GDAP2Q9NXN4 497 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 PCDHB8Q9UN66 801 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 IRAK3Q9Y616 596 aa13.69□□□□□ -0.22
RPUSD4-208ENST00000533628 KPNA7A9QM74 516 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 TRAPPC3O43617 180 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 STX10O60499 249 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 HLA-DRAP01903 254 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF165P49910 485 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 ZNF445P59923 1031 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 BIRC3Q13489 604 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 NCOA4Q13772 614 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 MRPL58Q14197 206 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 PTPN14Q15678 1187 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 USP41Q3LFD5 358 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 SV2CQ496J9 727 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 TCERG1LQ5VWI1 586 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 KRT39Q6A163 491 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 PDE12Q6L8Q7 609 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 AOPEPQ8N6M6 819 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 MRPL43Q8N983 215 aaKnown RBP13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 MYRIPQ8NFW9 859 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 LNX1Q8TBB1 728 aaPredicted RBP13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 SEMA4DQ92854 862 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 HPDLQ96IR7 371 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 C2orf71A6NGG8 1288 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 HIDE1A8MVS5 230 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 SYN3O14994 580 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 PHACTR2O75167 634 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 CYP11A1P05108 521 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 ATICP31939 592 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 FMO5P49326 533 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 GLUD2P49448 558 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 KCNH2Q12809 1159 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 PTPROQ16827 1216 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 HSP90AA4PQ58FG1 418 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 TCP11X2Q5H9J9 407 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 LRSAM1Q6UWE0 723 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 TMC7Q7Z402 723 aa13.68□□□□□ -0.22
RPUSD4-208ENST00000533628 FAM114A1Q8IWE2 563 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms