RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 EFEMP2O95967 443 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 TNNC2P02585 160 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 DLATP10515 647 aaKnown RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 OR1D2P34982 312 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 SNRNP35Q16560 246 aaKnown RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 CTXN3Q4LDR2 81 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 VARS2Q5ST30 1063 aaKnown RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 LIN9Q5TKA1 542 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 C9orf57Q5W0N0 161 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 ZNF280DQ6N043 979 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 SYCE2Q6PIF2 218 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 CD300LGQ6UXG3 332 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 TMEM184AQ6ZMB5 413 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 XXYLT1Q8NBI6 393 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 GOLGA5Q8TBA6 731 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 LNX1Q8TBB1 728 aaPredicted RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 ERCC4Q92889 916 aaPredicted RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 SMARCE1Q969G3 411 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 CCDC127Q96BQ5 260 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 ANKRD36BP1Q96IX9 119 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 FNBP1Q96RU3 617 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 PIDD1Q9HB75 910 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 RXFP1Q9HBX9 757 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 KIAA1586Q9HCI6 787 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 RMND1Q9NWS8 449 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 FNIP2Q9P278 1114 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 DPP7Q9UHL4 492 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 CDH22Q9UJ99 828 aa12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 TIMM13Q9Y5L4 95 aaPredicted RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 MTCL1Q9Y4B5 1905 aaKnown RBP12.4□□□□□ -0.42
UBASH3B-208ENST00000533451 SYN3O14994 580 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 TGFB1I1O43294 461 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 TGM5O43548 720 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 RHOBTB3O94955 611 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ITGB3P05106 788 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ADRB2P07550 413 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ODC1P11926 461 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 CPB1P15086 417 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 TNNI1P19237 187 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 LRPAP1P30533 357 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 TAF6P49848 677 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 SNRPFP62306 86 aaKnown RBP12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ITIH3Q06033 890 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 BFSP1Q12934 665 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 KCNC3Q14003 757 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 CBX2Q14781 532 aaPredicted RBP12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ZBTB6Q15916 424 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 BMT2Q1RMZ1 405 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 KREMEN2Q8NCW0 462 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 RPGRIP1Q96KN7 1286 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 SUSD3Q96L08 255 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 RIPOR3Q96MK2 946 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 POP1Q99575 1024 aaKnown RBP12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 CLSTN3Q9BQT9 956 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 MTMR12Q9C0I1 747 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 MTRRQ9UBK8 725 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 POLIQ9UNA4 740 aa12.39□□□□□ -0.43
UBASH3B-208ENST00000533451 C2orf16Q68DN1 1984 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 TNFRSF10AO00220 468 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 PRRG1O14668 218 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 ADAM12O43184 909 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 CALUO43852 315 aaPredicted RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 PRPF40AO75400 957 aaKnown RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 RFPL2O75678 378 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 NR3C1P04150 777 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 MTHFRP42898 656 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 WNT7BP56706 349 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 YWHAHQ04917 246 aaPredicted RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 SNW1Q13573 536 aaKnown RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 SURF1Q15526 300 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 SV2CQ496J9 727 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 ATAT1Q5SQI0 421 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 CEP135Q66GS9 1140 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 METTL23Q86XA0 190 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 NT5DC4Q86YG4 428 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 GPR65Q8IYL9 337 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 SMYD4Q8IYR2 804 aaPredicted RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 GJD3Q8N144 294 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 CSGALNACT2Q8N6G5 542 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 ENGASEQ8NFI3 743 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 ADAM7Q9H2U9 754 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 CGNQ9P2M7 1197 aaKnown RBP12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 AGAP1Q9UPQ3 857 aa12.38□□□□□ -0.43
UBASH3B-208ENST00000533451 CCDC195A0A1B0GUA6 201 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 ARHGEF37A1IGU5 675 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 PHACTR2O75167 634 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 ELF1P32519 619 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 PNPLA4P41247 253 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 LILRA4P59901 499 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 ZP2Q05996 745 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 CYP24A1Q07973 514 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 KCNB1Q14721 858 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 PPM1LQ5SGD2 360 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 ISM2Q6H9L7 571 aa12.37□□□□□ -0.43
UBASH3B-208ENST00000533451 OVOS1Q6IE37 1185 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms