RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 OR1D2P34982 312 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 CYP24A1Q07973 514 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 MYBPC2Q14324 1141 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 CBX2Q14781 532 aaPredicted RBP22.1■■□□□ 1.13
CCS-208ENST00000533244 PSMD6Q15008 389 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 CES5AQ6NT32 575 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 ELMSAN1Q6PJG2 1045 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 FEZF2Q8TBJ5 459 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 BORCS6Q96GS4 357 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 FAM84AQ96KN4 292 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 GZF1Q9H116 711 aaPredicted RBP22.1■■□□□ 1.13
CCS-208ENST00000533244 INTS13Q9NVM9 706 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 RMND1Q9NWS8 449 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 CDH22Q9UJ99 828 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 PCDHA5Q9Y5H7 936 aa22.1■■□□□ 1.13
CCS-208ENST00000533244 H7C4K7 107 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 OAZ2O95190 189 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 TAF6P49848 677 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 UBE2HP62256 183 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 NFIL3Q16649 462 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 C15orf39Q6ZRI6 1047 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 GPR149Q86SP6 731 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 WDR49Q8IV35 697 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 RDH13Q8NBN7 331 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 KREMEN2Q8NCW0 462 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 SENP8Q96LD8 212 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 MFSD14AQ96MC6 490 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 PHF7Q9BWX1 381 aaPredicted RBP22.09■■□□□ 1.13
CCS-208ENST00000533244 MTMR12Q9C0I1 747 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 CD320Q9NPF0 282 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 HOOK1Q9UJC3 728 aaKnown RBP22.09■■□□□ 1.13
CCS-208ENST00000533244 FBXL5Q9UKA1 691 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 ITGA11Q9UKX5 1188 aa22.09■■□□□ 1.13
CCS-208ENST00000533244 EXOC3O60645 756 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 KINO60870 393 aaKnown RBP22.08■■□□□ 1.13
CCS-208ENST00000533244 SMC2O95347 1197 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 ITGB3P05106 788 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 CYP11A1P05108 521 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 SPATA31D3P0C874 917 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 ROR1Q01973 937 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 COBLL1Q53SF7 1204 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 ZNF280DQ6N043 979 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 TMC5Q6UXY8 1006 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 DSTYKQ6XUX3 929 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 SPATA31D4Q6ZUB0 917 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 LRRC52Q8N7C0 313 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 OR5B17Q8NGF7 314 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 NECTIN4Q96NY8 510 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 ZDHHC7Q9NXF8 308 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 SIX4Q9UIU6 781 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 DENND4AQ7Z401 1863 aa22.08■■□□□ 1.13
CCS-208ENST00000533244 C2orf16Q68DN1 1984 aa22.08■■□□□ 1.12
CCS-208ENST00000533244 NR3C1P04150 777 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 TMEM191BP0C7N4 346 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 POLR2BP30876 1174 aaKnown RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 PNPLA4P41247 253 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 MTHFRP42898 656 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 YWHAHQ04917 246 aaPredicted RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 CTXN3Q4LDR2 81 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 ZCWPW2Q504Y3 356 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 LMBRD2Q68DH5 695 aaPredicted RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 SCARA3Q6AZY7 606 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 CYP26C1Q6V0L0 522 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 ERCC4Q92889 916 aaPredicted RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 SMARCE1Q969G3 411 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 ANKRD36BP1Q96IX9 119 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 RIPOR3Q96MK2 946 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 ZNF560Q96MR9 790 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 IPO9Q96P70 1041 aaKnown RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 POP1Q99575 1024 aaKnown RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 CGRRF1Q99675 332 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 MAPK8IP1Q9UQF2 711 aa22.07■■□□□ 1.12
CCS-208ENST00000533244 TIMM13Q9Y5L4 95 aaPredicted RBP22.07■■□□□ 1.12
CCS-208ENST00000533244 WDR27A2RRH5 827 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 CALUO43852 315 aaPredicted RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 RFPL2O75678 378 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ZMYND10O75800 440 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ABLIM3O94929 683 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ODC1P11926 461 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 DUOXA2Q1HG44 320 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 SV2CQ496J9 727 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ZNF658Q5TYW1 1059 aaPredicted RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 SMYD4Q8IYR2 804 aaPredicted RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 PLEKHO2Q8TD55 490 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ZNF707Q96C28 371 aaPredicted RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 OXCT2Q9BYC2 517 aaPredicted RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 POMKQ9H5K3 350 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 AGAP1Q9UPQ3 857 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 CCDC195A0A1B0GUA6 201 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ARHGEF37A1IGU5 675 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 KPNA7A9QM74 516 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 LOC730098B7Z3J9 87 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 TNFRSF10AO00220 468 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 PRPF40AO75400 957 aaKnown RBP22.06■■□□□ 1.12
CCS-208ENST00000533244 WEE2P0C1S8 567 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 HOXA9P31269 272 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 ATAT1Q5SQI0 421 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 RTL10Q7L3V2 364 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 GJD3Q8N144 294 aa22.06■■□□□ 1.12
CCS-208ENST00000533244 CSGALNACT2Q8N6G5 542 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms