RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 LIMS2Q7Z4I7 341 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 FAM71AQ8IYT1 594 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 KAT5Q92993 513 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 ARID3AQ99856 593 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 GDAP2Q9NXN4 497 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 INPP5FQ9Y2H2 1132 aa15.87■□□□□ 0.13
NXF1-214ENST00000533048 R3HCC1Q9Y3T6 440 aaKnown RBP15.87■□□□□ 0.13
NXF1-214ENST00000533048 CCDC85CA6NKD9 419 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 TMEM189-UBE2V1I3L0A0 370 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 ACRP10323 421 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 P4HA1P13674 534 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 ACO1P21399 889 aaKnown RBP15.86■□□□□ 0.13
NXF1-214ENST00000533048 SOX5P35711 763 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 PRKCIP41743 596 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 STAT1P42224 750 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 AARSP49588 968 aaKnown RBP eCLIP15.86■□□□□ 0.13
NXF1-214ENST00000533048 TAF6P49848 677 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 CCZ1BP86790 482 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 CCZ1P86791 482 aaPredicted RBP15.86■□□□□ 0.13
NXF1-214ENST00000533048 WDR72Q3MJ13 1102 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 SV2CQ496J9 727 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 SFMBT2Q5VUG0 894 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 COLGALT2Q8IYK4 626 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 ELMO3Q96BJ8 720 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 KCNF1Q9H3M0 494 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 CYP3A43Q9HB55 503 aa15.86■□□□□ 0.13
NXF1-214ENST00000533048 PODXLO00592 558 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 SPTLC1O15269 473 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 B4GALT3O60512 393 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 FGBP02675 491 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 FERP16591 822 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 EPHB4P54760 987 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 LILRA4P59901 499 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 DEFB103AP81534 67 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 INCA1Q0VD86 236 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 TMEM240Q5SV17 173 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 HGSNATQ68CP4 663 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 ZNF365Q70YC5 407 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 IRF2BP2Q7Z5L9 587 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 TNS4Q8IZW8 715 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 LRRC43Q8N309 656 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 TTC39CQ8N584 583 aa15.85■□□□□ 0.13
NXF1-214ENST00000533048 ZNF689Q96CS4 500 aaPredicted RBP15.85■□□□□ 0.13
NXF1-214ENST00000533048 BAG1Q99933 345 aaPredicted RBP15.85■□□□□ 0.13
NXF1-214ENST00000533048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.85■□□□□ 0.132e-6■■■□□ 19.2
NXF1-214ENST00000533048 TSC2P49815 1807 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 CASTOR2A6NHX0 329 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 KPNA7A9QM74 516 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 FOXN3O00409 490 aaPredicted RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 DDHD2O94830 711 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 FAM163BP0C2L3 166 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 IBSPP21815 317 aaPredicted RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 GATMP50440 423 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 CLCNKBP51801 687 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 ZNF132P52740 706 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 YWHAEP62258 255 aaKnown RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 TNNC1P63316 161 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 ARHGAP44Q17R89 818 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 TSR1Q2NL82 804 aaKnown RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 CD300LGQ6UXG3 332 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 ZNF280BQ86YH2 543 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 C3orf58Q8NDZ4 430 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 HERVK_113Q902F9 699 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 PAAF1Q9BRP4 392 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 TMEM175Q9BSA9 504 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 ZNHIT6Q9NWK9 470 aaKnown RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 NXF1Q9UBU9 619 aaKnown RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 POLIQ9UNA4 740 aa15.84■□□□□ 0.13
NXF1-214ENST00000533048 BZW2Q9Y6E2 419 aaKnown RBP15.84■□□□□ 0.13
NXF1-214ENST00000533048 TACC1O75410 805 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 SERPING1P05155 500 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 CCDC172P0C7W6 258 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 SYN1P17600 705 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 ANXA13P27216 316 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 KCNJ6P48051 423 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 ASIC2Q16515 512 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 RASIP1Q5U651 963 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 DCLRE1AQ6PJP8 1040 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 CYP26C1Q6V0L0 522 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 DPH6Q7L8W6 267 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 TMTC1Q8IUR5 882 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 CMTR2Q8IYT2 770 aaKnown RBP15.83■□□□□ 0.12
NXF1-214ENST00000533048 TOP6BLQ8N6T0 577 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 SPATA18Q8TC71 538 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.83■□□□□ 0.122e-10■■■■□ 20.7
NXF1-214ENST00000533048 SYT11Q9BT88 431 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 SDCBP2Q9H190 292 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 SMYD3Q9H7B4 428 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 NRDE2Q9H7Z3 1164 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 CISHQ9NSE2 258 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 ARHGAP20Q9P2F6 1191 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 CACNG4Q9UBN1 327 aa15.83■□□□□ 0.12
NXF1-214ENST00000533048 ZMYND8Q9ULU4 1186 aaPredicted RBP15.83■□□□□ 0.12
NXF1-214ENST00000533048 SSU72P8A0A1W2PR75 194 aa15.82■□□□□ 0.12
NXF1-214ENST00000533048 TBKBP1A7MCY6 615 aa15.82■□□□□ 0.12
NXF1-214ENST00000533048 NRDCO43847 1150 aa15.82■□□□□ 0.12
NXF1-214ENST00000533048 GFPT2O94808 682 aa15.82■□□□□ 0.12
NXF1-214ENST00000533048 PNMA6AP0CW24 399 aaPredicted RBP15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms