RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MRPL17Q9NRX2 175 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-211ENST00000533012 CHST7Q9NS84 486 aa12.1□□□□□ -0.47
TRAPPC4-211ENST00000533012 KCNJ18B7U540 433 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CYB561D2O14569 222 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 SPTLC1O15269 473 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 N4BP1O75113 896 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CLSTN1O94985 981 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CSPG5O95196 566 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 AFPP02771 609 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 URODP06132 367 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 POU3F3P20264 500 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 FGFR3P22607 806 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 EEF1GP26641 437 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CA8P35219 290 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 PIK3CAP42336 1068 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 GLUD2P49448 558 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 MXI1P50539 228 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 MYL6P60660 151 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 DSG1Q02413 1049 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 KCNH2Q12809 1159 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CAMK1Q14012 370 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 KCNJ12Q14500 433 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 SMC1AQ14683 1233 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 TCP11X2Q5H9J9 407 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 SCARA3Q6AZY7 606 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 PDXDC1Q6P996 788 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 GPR65Q8IYL9 337 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 RNF168Q8IYW5 571 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 MRPL43Q8N983 215 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 TAF4BQ92750 862 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 VN1R3Q9BXE9 311 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 IMPG2Q9BZV3 1241 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 TSPY26PQ9H489 355 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 RAB20Q9NX57 234 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 MTMR10Q9NXD2 777 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 PCDHB8Q9UN66 801 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 CHD9Q3L8U1 2897 aa12.09□□□□□ -0.47
TRAPPC4-211ENST00000533012 M0QZQ0 153 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 C2CD2LO14523 706 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 P4HA2O15460 535 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 HUS1O60921 280 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 VNN1O95497 513 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 STAU1O95793 577 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 HLA-DRAP01903 254 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 TPM2P07951 284 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 ODC1P11926 461 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 PRKCSHP14314 528 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 IRS1P35568 1242 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 FMO5P49326 533 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZNF445P59923 1031 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 TPM4P67936 248 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 NCAPHQ15003 741 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 MAN2A1Q16706 1144 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 WDR72Q3MJ13 1102 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 CBWD6Q4V339 395 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 WDR44Q5JSH3 913 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 CBWD3Q5JTY5 395 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 CBWD5Q5RIA9 395 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 CDKAL1Q5VV42 579 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 PLPP4Q5VZY2 271 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 METTL23Q86XA0 190 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 DHX40Q8IX18 779 aaKnown RBP12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 FBXL13Q8NEE6 735 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 TAS1R2Q8TE23 839 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 MYLIPQ8WY64 445 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 RIN2Q8WYP3 895 aaPredicted RBP12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 B3GALT6Q96L58 329 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 TUBGCP2Q9BSJ2 902 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 CBX8Q9HC52 389 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 GDAP2Q9NXN4 497 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 DSEQ9UL01 958 aa12.08□□□□□ -0.48
TRAPPC4-211ENST00000533012 GOLGA6L19H0YKK7 550 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 H7C4K7 107 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 FSCN2O14926 492 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 PMM2O15305 246 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 LILRB3O75022 631 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 P4HA1P13674 534 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TYMPP19971 482 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TKTP29401 623 aaKnown RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 TNNC1P63316 161 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 MYL7Q01449 175 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 YWHAHQ04917 246 aaPredicted RBP12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 ADGRE1Q14246 886 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 IQCB1Q15051 598 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 PTPN14Q15678 1187 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZNF699Q32M78 642 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 VWA3BQ502W6 1294 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 ZNF667Q5HYK9 610 aa12.07□□□□□ -0.48
TRAPPC4-211ENST00000533012 RTP2Q5QGT7 225 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms