RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 OAS2P29728 719 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 HOXD13P35453 343 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 CCR5P51681 352 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 OXCT1P55809 520 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SOX8P57073 446 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 AP2B1P63010 937 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MXRA7P84157 204 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MAP3K12Q12852 859 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC13A2Q13183 592 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 EIF4A2Q14240 407 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ERV3-1Q14264 604 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 UBE3CQ15386 1083 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 TARBP2Q15633 366 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 BAK1Q16611 211 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MST1LQ2TV78 715 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 FLYWCH1Q4VC44 716 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC10A5Q5PT55 438 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 CDKAL1Q5VV42 579 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 HAUS3Q68CZ6 603 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ZPBP2Q6X784 338 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 TMTC3Q6ZXV5 915 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 UNC13DQ70J99 1090 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ZNF765Q7L2R6 523 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ANKS1BQ7Z6G8 1248 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MICU3Q86XE3 530 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 CREG2Q8IUH2 290 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC44A2Q8IWA5 706 aaPredicted RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SPACA3Q8IXA5 215 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 YAF2Q8IY57 180 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SH2D3CQ8N5H7 860 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 GLIS1Q8NBF1 620 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 SSH3Q8TE77 659 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 IPO4Q8TEX9 1081 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MAML1Q92585 1016 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 TOE1Q96GM8 510 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 JMJD8Q96S16 334 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 PRPF18Q99633 342 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 VRK1Q99986 396 aaPredicted RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 BTBD2Q9BX70 525 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MRPL9Q9BYD2 267 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 ARHGAP39Q9C0H5 1083 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 KIAA1683Q9H0B3 1180 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 PRDM13Q9H4Q3 707 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 BCO1Q9HAY6 547 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 PRDM8Q9NQV8 689 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 KCND1Q9NSA2 647 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 KRT84Q9NSB2 600 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 GJB4Q9NTQ9 266 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 GALNT8Q9NY28 637 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 NUDT5Q9UKK9 219 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 MTO1Q9Y2Z2 717 aaKnown RBP4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 PCDHA1Q9Y5I3 950 aa4.88□□□□□ -1.63
AC055878.1-201ENST00000531858 A0A1W2PR48 441 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 H3BS24 57 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 PIP5K1BO14986 540 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 DOK2O60496 412 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ACTL6BO94805 426 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 STARD3NLO95772 234 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ABHD16AO95870 558 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 DNTTP04053 509 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 CNPP09543 421 aaKnown RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 RARBP10826 455 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 EGR1P18146 543 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 PSMA3P25788 255 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 IL1R2P27930 398 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC6A9P48067 706 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 POLD2P49005 469 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 CLK1P49759 484 aaKnown RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC12A1Q13621 1099 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ANKRD1Q15327 319 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 SURF1Q15526 300 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ATP2B3Q16720 1220 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 FAM26FQ5R3K3 315 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ATPAF1Q5TC12 328 aaPredicted RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 KIAA1614Q5VZ46 1190 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 LMBRD2Q68DH5 695 aaPredicted RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 SLC30A6Q6NXT4 461 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 GALNT18Q6P9A2 607 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ARHGAP27Q6ZUM4 889 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 PPP1R3BQ86XI6 285 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ARMC8Q8IUR7 673 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 RBM12BQ8IXT5 1001 aaKnown RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 DZIP1LQ8IYY4 767 aaKnown RBP4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 NDUFAF2Q8N183 169 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 TMEM57Q8N5G2 664 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 AFG1LQ8WV93 481 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 CASKIN2Q8WXE0 1202 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 LINC01599Q8WXQ3 324 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ZUFSPQ96AP4 578 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 TMX3Q96JJ7 454 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 HSPA12BQ96MM6 686 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 TWNKQ96RR1 684 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 FAM83CQ9BQN1 747 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 DBNDD2Q9BQY9 259 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 ADPGKQ9BRR6 497 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 RTKNQ9BST9 563 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 KRTAP4-2Q9BYR5 136 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 TXLNGYQ9BZA5 131 aa4.87□□□□□ -1.63
AC055878.1-201ENST00000531858 GPR63Q9BZJ6 419 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms