RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 OVOS1Q6IE37 1185 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 SLC39A4Q6P5W5 647 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 ASIC4Q96FT7 647 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 CCDC34Q96HJ3 373 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 MYADMQ96S97 322 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 TRIM9Q9C026 710 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 KIAA1586Q9HCI6 787 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 KBTBD4Q9NVX7 518 aa13.61□□□□□ -0.23
C11orf54-210ENST00000531516 RBAKQ9NYW8 714 aaPredicted RBP13.61□□□□□ -0.23
C11orf54-210ENST00000531516 WDR27A2RRH5 827 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 EIF3DO15371 548 aaKnown RBP eCLIP13.6□□□□□ -0.23
C11orf54-210ENST00000531516 EXTL3O43909 919 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 FAM189A1O60320 539 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 NFICP08651 508 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 SRFP11831 508 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 TAF6P49848 677 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 PTPN5P54829 565 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 LILRA4P59901 499 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 TFAMQ00059 246 aaKnown RBP13.6□□□□□ -0.23
C11orf54-210ENST00000531516 ADCY1Q08828 1119 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 MYBPC2Q14324 1141 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 C9orf57Q5W0N0 161 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 RSPO2Q6UXX9 243 aaPredicted RBP13.6□□□□□ -0.23
C11orf54-210ENST00000531516 PDZD4Q76G19 769 aaPredicted RBP13.6□□□□□ -0.23
C11orf54-210ENST00000531516 HS2ST1Q7LGA3 356 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 CCDC47Q96A33 483 aaKnown RBP13.6□□□□□ -0.23
C11orf54-210ENST00000531516 SENP8Q96LD8 212 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 GDE1Q9NZC3 331 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 INSL5Q9Y5Q6 135 aa13.6□□□□□ -0.23
C11orf54-210ENST00000531516 A0A087X0B3 334 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 TBC1D4O60343 1298 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 PRPF6O94906 941 aaKnown RBP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 TMEM191BP0C7N4 346 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 IGFBP6P24592 240 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 AVPR2P30518 371 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 AARSP49588 968 aaKnown RBP eCLIP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 EPHB3P54753 998 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SNRPFP62306 86 aaKnown RBP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 DNM1Q05193 864 aaKnown RBP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SMARCB1Q12824 385 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 VEPH1Q14D04 833 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 FAM26FQ5R3K3 315 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SHC4Q6S5L8 630 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 BRSK2Q8IWQ3 736 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SLC44A3Q8N4M1 653 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 FGF13Q92913 245 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SHDQ96IW2 340 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 ANKRD36BP1Q96IX9 119 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 SPATA32Q96LK8 384 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 C7orf25Q9BPX7 421 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 CORO1BQ9BR76 489 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 STRA6Q9BX79 667 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 ASAH2Q9NR71 780 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 WNT16Q9UBV4 365 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 PCDHA7Q9UN72 937 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 TIMM13Q9Y5L4 95 aaPredicted RBP13.59□□□□□ -0.23
C11orf54-210ENST00000531516 UBE4BO95155 1302 aa13.59□□□□□ -0.23
C11orf54-210ENST00000531516 PVALEFA0A1B0GWK0 134 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 TISP43B9A030 160 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 PIRO00625 290 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 CYB561D2O14569 222 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 MEFVO15553 781 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 FGF19O95750 216 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 TNNC2P02585 160 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 RHOP08100 348 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 ADSSP30520 456 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 CLCN5P51795 746 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 GUCY2FP51841 1108 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 NTHL1P78549 312 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 PFKPQ01813 784 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 MYO1EQ12965 1108 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 GPR17Q13304 367 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 E2F4Q16254 413 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 TAF12Q16514 161 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 RESP18Q5W5W9 173 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 ASTLQ6HA08 431 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 CNNM4Q6P4Q7 775 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 UNC13DQ70J99 1090 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 DCP1BQ8IZD4 617 aaKnown RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 SIX5Q8N196 739 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 FLCNQ8NFG4 579 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 GOLGA5Q8TBA6 731 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 SAAL1Q96ER3 474 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 RTP3Q9BQQ7 232 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 AVENQ9NQS1 362 aaPredicted RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 CGNQ9P2M7 1197 aaKnown RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 DNMT3BQ9UBC3 853 aaKnown RBP13.58□□□□□ -0.24
C11orf54-210ENST00000531516 RCOR1Q9UKL0 485 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 NUMBLQ9Y6R0 609 aa13.58□□□□□ -0.24
C11orf54-210ENST00000531516 ANO9A1A5B4 782 aa13.57□□□□□ -0.24
C11orf54-210ENST00000531516 KPNA7A9QM74 516 aa13.57□□□□□ -0.24
C11orf54-210ENST00000531516 ANHXE9PGG2 379 aa13.57□□□□□ -0.24
C11orf54-210ENST00000531516 HUS1O60921 280 aa13.57□□□□□ -0.24
C11orf54-210ENST00000531516 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
C11orf54-210ENST00000531516 PRPF40AO75400 957 aaKnown RBP13.57□□□□□ -0.24
C11orf54-210ENST00000531516 MICAL2O94851 1124 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms