RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 RNF113AO15541 343 aaKnown RBP8.45□□□□□ -1.06
CHKA-205ENST00000530730 NDUFB10O96000 172 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 LRG1P02750 347 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 AKR1A1P14550 325 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 COPB2P35606 906 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 EPHB4P54760 987 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 HSP90AA2PQ14568 343 aaPredicted RBP8.45□□□□□ -1.06
CHKA-205ENST00000530730 ANKRD45Q5TZF3 282 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 SNRNP48Q6IEG0 339 aaKnown RBP8.45□□□□□ -1.06
CHKA-205ENST00000530730 GIMAP6Q6P9H5 292 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 TRIM48Q8IWZ4 208 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 KBTBD3Q8NAB2 608 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 PRPF38AQ8NAV1 312 aaKnown RBP8.45□□□□□ -1.06
CHKA-205ENST00000530730 MKL1Q969V6 931 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 IER2Q9BTL4 223 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 TEX13BQ9BXU2 312 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 DCTPP1Q9H773 170 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 SLC6A20Q9NP91 592 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 ASH2LQ9UBL3 628 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 CNPY2Q9Y2B0 182 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 EYSQ5T1H1 3165 aa8.45□□□□□ -1.06
CHKA-205ENST00000530730 MYH8P13535 1937 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 IGKV6D-41A0A0C4DH26 115 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 ATP2A1O14983 1001 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 KLF4O43474 513 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 DLX3O60479 287 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 ZBED4O75132 1171 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 PRDM1O75626 825 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 CENPBP07199 599 aaPredicted RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 CLTBP09497 229 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 ACLYP53396 1101 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 SMAD3P84022 425 aaKnown RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 CCSAPQ6IQ19 270 aaPredicted RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 PKN3Q6P5Z2 889 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 MAMDC4Q6UXC1 1216 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 ZNF444Q8N0Y2 327 aaPredicted RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 CPXCR1Q8N123 301 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 MSL3Q8N5Y2 521 aaKnown RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 CELF2-AS1Q8N7Q2 184 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 KLHDC9Q8NEP7 349 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 HNRNPLLQ8WVV9 542 aaKnown RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 APPBP2Q92624 585 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 GPR20Q99678 358 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 ZFYVE21Q9BQ24 234 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 KRTAP3-1Q9BYR8 98 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 TTYH1Q9H313 450 aaPredicted RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 RAVER2Q9HCJ3 691 aaKnown RBP8.44□□□□□ -1.06
CHKA-205ENST00000530730 FAM184BQ9ULE4 1060 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 ZNF236Q9UL36 1845 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 VCANP13611 3396 aa8.44□□□□□ -1.06
CHKA-205ENST00000530730 A0A0G2JMZ2 1700 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 M0R2C6 588 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 GPAA1O43292 621 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 DUSP11O75319 330 aaKnown RBP8.43□□□□□ -1.06
CHKA-205ENST00000530730 APPP05067 770 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 FGFR1P11362 822 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 ACVR2BQ13705 512 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 ANKRD33Q7Z3H0 272 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 ST13P5Q8NFI4 369 aaPredicted RBP8.43□□□□□ -1.06
CHKA-205ENST00000530730 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 CEP95Q96GE4 821 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 SLC38A10Q9HBR0 1119 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 STARD7Q9NQZ5 370 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 MTMR4Q9NYA4 1195 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 SYNRGQ9UMZ2 1314 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 PRUNE2Q8WUY3 3088 aa8.43□□□□□ -1.06
CHKA-205ENST00000530730 MYADML2A6NDP7 307 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ADCY6O43306 1168 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 TTLL1O95922 423 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ZFYP08048 801 aaPredicted RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 GNAT2P19087 354 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 DNAJA1P31689 397 aaKnown RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 TDO2P48775 406 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 CDK7P50613 346 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 FPGSQ05932 587 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 CCDC144BQ3MJ40 725 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 CPZQ66K79 652 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 SLFN13Q68D06 897 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ANKS3Q6ZW76 656 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 IFNL3Q8IZI9 196 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ANKRD35Q8N283 1001 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 GMCL1P1Q8NEA9 526 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 MAFAQ8NHW3 353 aaPredicted RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 NUP133Q8WUM0 1156 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 DCAF4Q8WV16 495 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ZNF669Q96BR6 464 aaPredicted RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 RNPC3Q96LT9 517 aaKnown RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 SEC62Q99442 399 aaKnown RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 AARSD1Q9BTE6 412 aaKnown RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 L2HGDHQ9H9P8 463 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ZNF287Q9HBT7 754 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 FEM1BQ9UK73 627 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 ZHX1Q9UKY1 873 aaPredicted RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 CTDP1Q9Y5B0 961 aaPredicted RBP8.42□□□□□ -1.06
CHKA-205ENST00000530730 ROBO3Q96MS0 1386 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 FRMPD3Q5JV73 1810 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 CDH23Q9H251 3354 aa8.42□□□□□ -1.06
CHKA-205ENST00000530730 SMCHD1A6NHR9 2005 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms