RNA–Protein interactions for RNA: ENST00000530656.5

PRDM11-204, Transcript of PR/SET domain 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRDM11, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM11-204ENST00000530656 RHOXF2Q9BQY4 288 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 NUP85Q9BW27 656 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 TRIM6Q9C030 488 aaPredicted RBP14.04□□□□□ -0.16
PRDM11-204ENST00000530656 ZNF518BQ9C0D4 1074 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 XYLT2Q9H1B5 865 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 ARFGAP3Q9NP61 516 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 ACP6Q9NPH0 428 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 CISHQ9NSE2 258 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 CNOT8Q9UFF9 292 aaKnown RBP14.04□□□□□ -0.16
PRDM11-204ENST00000530656 GINS2Q9Y248 185 aa14.04□□□□□ -0.16
PRDM11-204ENST00000530656 CEP350Q5VT06 3117 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 PGRMC1O00264 195 aaKnown RBP14.03□□□□□ -0.16
PRDM11-204ENST00000530656 XPOTO43592 962 aaKnown RBP14.03□□□□□ -0.16
PRDM11-204ENST00000530656 NPTXRO95502 500 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 HOXD10P28358 340 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 CTGFP29279 349 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 DNA2P51530 1060 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 C2orf54Q08AI8 447 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 GNASQ5JWF2 1037 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 RUFY4Q6ZNE9 571 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 PHF13Q86YI8 300 aaPredicted RBP14.03□□□□□ -0.16
PRDM11-204ENST00000530656 TMEM192Q8IY95 271 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 MCOLN2Q8IZK6 566 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 C1orf127Q8N9H9 656 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 TRPV1Q8NER1 839 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 DNAJB3Q8WWF6 145 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 TRIB2Q92519 343 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 CFHR5Q9BXR6 569 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 BCO2Q9BYV7 579 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 CARD9Q9H257 536 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 MRPL47Q9HD33 250 aaKnown RBP14.03□□□□□ -0.16
PRDM11-204ENST00000530656 PACSIN2Q9UNF0 486 aaPredicted RBP14.03□□□□□ -0.16
PRDM11-204ENST00000530656 SCINQ9Y6U3 715 aa14.03□□□□□ -0.16
PRDM11-204ENST00000530656 CCDC188H7C350 402 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 CEP104O60308 925 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 ITGB3P05106 788 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 PAEPP09466 180 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 ASPAP45381 313 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 NOMO3P69849 1222 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 SP3Q02447 781 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 C1QBPQ07021 282 aaKnown RBP14.02□□□□□ -0.16
PRDM11-204ENST00000530656 MYO1EQ12965 1108 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 SNX17Q15036 470 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 PPP2R5EQ16537 467 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 NAA35Q5VZE5 725 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 RASGEF1CQ8N431 466 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 USP38Q8NB14 1042 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 TMEM35BQ8NCS4 154 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 ELMO3Q96BJ8 720 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.02□□□□□ -0.161e-6■■■□□ 17.6
PRDM11-204ENST00000530656 WNT8AQ9H1J5 351 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 SIX4Q9UIU6 781 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 TTC7AQ9ULT0 858 aaPredicted RBP14.02□□□□□ -0.16
PRDM11-204ENST00000530656 COG5Q9UP83 839 aa14.02□□□□□ -0.16
PRDM11-204ENST00000530656 TREHO43280 583 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 CALB1P05937 261 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 CD58P19256 250 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 HOXA11P31270 313 aaPredicted RBP14.01□□□□□ -0.17
PRDM11-204ENST00000530656 PRKCZQ05513 592 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 TMEM62Q0P6H9 643 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 WDR72Q3MJ13 1102 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 C8orf74Q6P047 294 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 CC2D1AQ6P1N0 951 aaPredicted RBP14.01□□□□□ -0.17
PRDM11-204ENST00000530656 BEST2Q8NFU1 509 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 ZNF606Q8WXB4 792 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 KIF12Q96FN5 646 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 SNX27Q96L92 541 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 PLVAPQ9BX97 442 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 ARHGAP39Q9C0H5 1083 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 DNAI2Q9GZS0 605 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 DPP3Q9NY33 737 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 NXF1Q9UBU9 619 aaKnown RBP14.01□□□□□ -0.17
PRDM11-204ENST00000530656 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 GABRQQ9UN88 632 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.01□□□□□ -0.17
PRDM11-204ENST00000530656 CITO14578 2027 aa14.01□□□□□ -0.17
PRDM11-204ENST00000530656 CCDC66A2RUB6 948 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 ATF7P17544 494 aaPredicted RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 FGFR4P22455 802 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 POLR2BP30876 1174 aaKnown RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 SLC1A1P43005 524 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 CAP1Q01518 475 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 MESDQ14696 234 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 SCARA5Q6ZMJ2 495 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 MON1BQ7L1V2 547 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 CYFIP2Q96F07 1278 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 HPDLQ96IR7 371 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 PNKPQ96T60 521 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 CELF4Q9BZC1 486 aaKnown RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 EPC1Q9H2F5 836 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 GOLPH3Q9H4A6 298 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 ADAM22Q9P0K1 906 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 GTF2IRD1Q9UHL9 959 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 AGAP1Q9UPQ3 857 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 PIN4Q9Y237 131 aaKnown RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 ALG6Q9Y672 507 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 GOLGA6L10A0A0M3HER8 536 aa14□□□□□ -0.17
PRDM11-204ENST00000530656 TLR3O15455 904 aaKnown RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 DDX3YO15523 660 aaKnown RBP14□□□□□ -0.17
PRDM11-204ENST00000530656 SPOPO43791 374 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms