RNA–Protein interactions for RNA: ENST00000530036.1

RPUSD4-204, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 3

Gene RPUSD4, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-204ENST00000530036 TAS1R1Q7RTX1 841 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TRAPPC11Q7Z392 1133 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 FILIP1Q7Z7B0 1213 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 USP37Q86T82 979 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 ALYREFQ86V81 257 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MRPL43Q8N983 215 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MAFAQ8NHW3 353 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 LNX1Q8TBB1 728 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 AUTS2Q8WXX7 1259 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PPP2R3CQ969Q6 453 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 SLC35C1Q96A29 364 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 SYAP1Q96A49 352 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CCDC127Q96BQ5 260 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 EEF2KMTQ96G04 330 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 B3GALT6Q96L58 329 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 POP1Q99575 1024 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 CDCA3Q99618 268 aaPredicted RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 TTPALQ9BTX7 342 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MRPL17Q9NRX2 175 aaKnown RBP6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 GDAP2Q9NXN4 497 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 FNIP2Q9P278 1114 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 MTRRQ9UBK8 725 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 DACH1Q9UI36 760 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PCDHB8Q9UN66 801 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 NUB1Q9Y5A7 615 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 PATJQ8NI35 1801 aa6.11□□□□□ -1.43
RPUSD4-204ENST00000530036 NCOR1O75376 2440 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VCANP13611 3396 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 DOCK6Q96HP0 2047 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 BDP1A6H8Y1 2624 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 GREB1Q4ZG55 1949 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 KPNA7A9QM74 516 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TEX28O15482 410 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TBX10O75333 385 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 OAZ2O95190 189 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CSPG5O95196 566 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VNN1O95497 513 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CXCL14O95715 111 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 GLP2RO95838 553 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 C1RP00736 705 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 C4BPAP04003 597 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ADH1AP07327 375 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CNPP09543 421 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ODC1P11926 461 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 KRT13P13646 458 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TYMPP19971 482 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 GTF2H1P32780 548 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 GTF2F1P35269 517 aaKnown RBP eCLIP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 NRIP1P48552 1158 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 NDUFV1P49821 464 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VAMP7P51809 220 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 STX17P56962 302 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 RBP5P82980 135 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CREMQ03060 361 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 PPP3CAQ08209 521 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 BMS1Q14692 1282 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 STX1AQ16623 288 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SV2CQ496J9 727 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VARS2Q5ST30 1063 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TDRD10Q5VZ19 366 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SLC8B1Q6J4K2 584 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ZNF280DQ6N043 979 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 PRSS55Q6UWB4 352 aaPredicted RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 RSPO2Q6UXX9 243 aaPredicted RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TMEM184AQ6ZMB5 413 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 C11orf57Q6ZUT1 292 aaPredicted RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ANKS3Q6ZW76 656 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SV2AQ7L0J3 742 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 FRMD5Q7Z6J6 570 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 IRF2BP1Q8IU81 584 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 TRIM59Q8IWR1 403 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 MICALL1Q8N3F8 863 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CSGALNACT2Q8N6G5 542 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 EFHBQ8N7U6 833 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VN1R2Q8NFZ6 395 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SPATA18Q8TC71 538 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 MICAL1Q8TDZ2 1067 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 RIN2Q8WYP3 895 aaPredicted RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 PABPC5Q96DU9 382 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SENP8Q96LD8 212 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 KLHL5Q96PQ7 755 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 CLSTN3Q9BQT9 956 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ANP32EQ9BTT0 268 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 FUCA2Q9BTY2 467 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SRRTQ9BXP5 876 aaKnown RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 XYLT2Q9H1B5 865 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 VRTNQ9H8Y1 702 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ANO10Q9NW15 660 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 ARMCX3Q9UH62 379 aaPredicted RBP6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 L1RE1Q9UN81 338 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 AGAP1Q9UPQ3 857 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 SSX2IPQ9Y2D8 614 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 BACE2Q9Y5Z0 518 aa6.1□□□□□ -1.43
RPUSD4-204ENST00000530036 NOTCH4Q99466 2003 aa6.09□□□□□ -1.43
RPUSD4-204ENST00000530036 DENND4CQ5VZ89 1909 aa6.09□□□□□ -1.43
RPUSD4-204ENST00000530036 OBSL1O75147 1896 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms