RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 USP34Q70CQ2 3546 aa14.12□□□□□ -0.15
CPSF1-204ENST00000529288 MTCL1Q9Y4B5 1905 aaKnown RBP14.11□□□□□ -0.15
CPSF1-204ENST00000529288 A0A0B4J269 797 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 TISP43B9A030 160 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ANKRD63C9JTQ0 380 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 M0QZQ0 153 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 NRG2O14511 850 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-204ENST00000529288 LAMTOR5O43504 91 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 SP9P0CG40 484 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 CYP3A5P20815 502 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 DDIT3P35638 169 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ZNF131P52739 623 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 DUSP4Q13115 394 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ZBTB6Q15916 424 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 PRSS36Q5K4E3 855 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 OVOS1Q6IE37 1185 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ARMCX5Q6P1M9 558 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 FAM173BQ6P4H8 233 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 USP49Q70CQ1 688 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 GPIHBP1Q8IV16 184 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ELSPBP1Q96BH3 223 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 ZSWIM3Q96MP5 696 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 LTB4R2Q9NPC1 389 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 AVENQ9NQS1 362 aaPredicted RBP14.11□□□□□ -0.15
CPSF1-204ENST00000529288 TBC1D7Q9P0N9 293 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 CCDC39Q9UFE4 941 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 YIPF1Q9Y548 306 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 VWA8A3KMH1 1905 aa14.11□□□□□ -0.15
CPSF1-204ENST00000529288 OR6C75A6NL08 312 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 OAZ2O95190 189 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 PIGRP01833 764 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 LMNAP02545 664 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 NFICP08651 508 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 GDI1P31150 447 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 VIPR2P41587 438 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 ALDH1A3P47895 512 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 EPHB3P54753 998 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 CSTF1Q05048 431 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 TMEM132DQ14C87 1099 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 TEAD2Q15562 447 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 SPATA1Q5VX52 437 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 RRAGBQ5VZM2 374 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 SLC39A4Q6P5W5 647 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 CD302Q8IX05 232 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 NOC3LQ8WTT2 800 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 SENP8Q96LD8 212 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 CLIC6Q96NY7 704 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 TMEM209Q96SK2 561 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 TRMT61BQ9BVS5 477 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 PANK2Q9BZ23 570 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 IKZF4Q9H2S9 585 aa14.1□□□□□ -0.15
CPSF1-204ENST00000529288 CPSF3Q9UKF6 684 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 NDRG2Q9UN36 371 aaKnown RBP14.1□□□□□ -0.15
CPSF1-204ENST00000529288 A0A1W2PRU2 124 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 SOAT2O75908 522 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ODC1P11926 461 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 PDCP20941 246 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 SCP2P22307 547 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 TARSP26639 723 aaKnown RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 TXLNAP40222 546 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 LILRA4P59901 499 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 GTF2BQ00403 316 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 PLD1Q13393 1074 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 C9orf57Q5W0N0 161 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ZC3H14Q6PJT7 736 aaKnown RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ZNF852Q6ZMS4 543 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 SFR1Q86XK3 245 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 MAP4K3Q8IVH8 894 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ATAD1Q8NBU5 361 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ZSCAN18Q8TBC5 510 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 POMGNT1Q8WZA1 660 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 SMARCD2Q92925 531 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 ASB16Q96NS5 453 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 DDX23Q9BUQ8 820 aaKnown RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 OXCT2Q9BYC2 517 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 CCSER1Q9C0I3 900 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 CRISPLD1Q9H336 500 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 MRPL44Q9H9J2 332 aaKnown RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 AGO2Q9UKV8 859 aaKnown RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 MAFFQ9ULX9 164 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.09□□□□□ -0.15
CPSF1-204ENST00000529288 GTF3C3Q9Y5Q9 886 aa14.09□□□□□ -0.15
CPSF1-204ENST00000529288 COL4A3Q01955 1670 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 SPTLC1O15269 473 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 NCAM2O15394 837 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 FAM189A1O60320 539 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 MOSPD3O75425 235 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 MICAL2O94851 1124 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 IDEP14735 1019 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 TYMPP19971 482 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 FCARP24071 287 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 ABCD1P33897 745 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 GPR17Q13304 367 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 CUL4AQ13619 759 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 SLFN12LQ6IEE8 588 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 VITQ6UXI7 678 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 SV2BQ7L1I2 683 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 METTL23Q86XA0 190 aa14.08□□□□□ -0.16
CPSF1-204ENST00000529288 YAF2Q8IY57 180 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms