RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 REPS2Q8NFH8 660 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 APOBEC3GQ9HC16 384 aaKnown RBP24.82■■□□□ 1.56
GSDMD-208ENST00000528475 DNAJC17Q9NVM6 304 aaKnown RBP24.82■■□□□ 1.56
GSDMD-208ENST00000528475 NAALADL1Q9UQQ1 740 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 PCDHB4Q9Y5E5 795 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 KIAA1217Q5T5P2 1943 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 STAM2O75886 525 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 LDHAP00338 332 aaKnown RBP24.82■■□□□ 1.56
GSDMD-208ENST00000528475 CETN2P41208 172 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 MPP2Q14168 576 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 SPOPLQ6IQ16 392 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 DRICH1Q6PGQ1 229 aaPredicted RBP24.82■■□□□ 1.56
GSDMD-208ENST00000528475 ARHGEF18Q6ZSZ5 1173 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 FEZF2Q8TBJ5 459 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 MAGEB18Q96M61 343 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 PTPRJQ12913 1337 aa24.82■■□□□ 1.56
GSDMD-208ENST00000528475 CFHP08603 1231 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 CLTAP09496 248 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 VPS41P49754 854 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 NUGGCQ68CJ6 796 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 MIS18BP1Q6P0N0 1132 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 CYP4X1Q8N118 509 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 ANKRD42Q8N9B4 389 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 WNK4Q96J92 1243 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 PARVAQ9NVD7 372 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 PRKAG3Q9UGI9 489 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 IP6K2Q9UHH9 426 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 ARL2BPQ9Y2Y0 163 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 CD2APQ9Y5K6 639 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 TLR3O15455 904 aaKnown RBP24.81■■□□□ 1.56
GSDMD-208ENST00000528475 ATP6V1G2O95670 118 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 CETPP11597 493 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 EMC2Q15006 297 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 DAB2IPQ5VWQ8 1189 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 PPP1R21Q6ZMI0 780 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 SPATA21Q7Z572 469 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 RCOR2Q8IZ40 523 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 RBBP8NLQ8NC74 664 aaPredicted RBP24.81■■□□□ 1.56
GSDMD-208ENST00000528475 PWWP2AQ96N64 755 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 CGRRF1Q99675 332 aa24.81■■□□□ 1.56
GSDMD-208ENST00000528475 UBOX5O94941 541 aa24.8■■□□□ 1.56
GSDMD-208ENST00000528475 ACOT2P49753 483 aa24.8■■□□□ 1.56
GSDMD-208ENST00000528475 FAM133BQ5BKY9 247 aaKnown RBP24.8■■□□□ 1.56
GSDMD-208ENST00000528475 TMEM270Q6UE05 265 aa24.8■■□□□ 1.56
GSDMD-208ENST00000528475 RBM41Q96IZ5 413 aaKnown RBP24.8■■□□□ 1.56
GSDMD-208ENST00000528475 HAPLN2Q9GZV7 340 aa24.8■■□□□ 1.56
GSDMD-208ENST00000528475 RBAKQ9NYW8 714 aaPredicted RBP24.8■■□□□ 1.56
GSDMD-208ENST00000528475 TELO2Q9Y4R8 837 aa24.8■■□□□ 1.56
GSDMD-208ENST00000528475 SPATA31C2B4DYI2 1134 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 SUPT20HL2P0C7V6 817 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MAP2K2P36507 400 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 NAMPTP43490 491 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 NFX1Q12986 1120 aaKnown RBP24.79■■□□□ 1.56
GSDMD-208ENST00000528475 SUPT20HL1Q3ZLR7 823 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 ANKS1BQ7Z6G8 1248 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 PASD1Q8IV76 773 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MAF1Q9H063 256 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 GEMIN8Q9NWZ8 242 aaKnown RBP24.79■■□□□ 1.56
GSDMD-208ENST00000528475 NKIRAS1Q9NYS0 192 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 AGAP1Q9UPQ3 857 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 ZNF541Q9H0D2 1346 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 LIASO43766 372 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 KCNA3P22001 575 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 STX2P32856 288 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MAGEA4P43358 317 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 NCALDP61601 193 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MCL1Q07820 350 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 SF3A3Q12874 501 aaKnown RBP eCLIP24.79■■□□□ 1.562e-6■■■□□ 15.6
GSDMD-208ENST00000528475 BNIP1Q12981 228 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 NR1H3Q13133 447 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MTERF2Q49AM1 385 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 LRRC38Q5VT99 294 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 ANKRD35Q8N283 1001 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 MAML1Q92585 1016 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 GRAMD1AQ96CP6 724 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 PORCNQ9H237 461 aa24.79■■□□□ 1.56
GSDMD-208ENST00000528475 DNALI1O14645 258 aaPredicted RBP24.78■■□□□ 1.56
GSDMD-208ENST00000528475 DPEP1P16444 411 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 CD58P19256 250 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 ZNF132P52740 706 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 POLGP54098 1239 aaPredicted RBP24.78■■□□□ 1.56
GSDMD-208ENST00000528475 SNRNP48Q6IEG0 339 aaKnown RBP24.78■■□□□ 1.56
GSDMD-208ENST00000528475 TDRPQ86YL5 185 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 CFAP57Q96MR6 1250 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 TTC25Q96NG3 672 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 TGS1Q96RS0 853 aaKnown RBP24.78■■□□□ 1.56
GSDMD-208ENST00000528475 RBM15Q96T37 977 aaKnown RBP eCLIP24.78■■□□□ 1.561e-8■□□□□ 9.2
GSDMD-208ENST00000528475 MYCBPQ99417 103 aaPredicted RBP24.78■■□□□ 1.56
GSDMD-208ENST00000528475 NOD2Q9HC29 1040 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 ADAMTS5Q9UNA0 930 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 RLFQ13129 1914 aa24.78■■□□□ 1.56
GSDMD-208ENST00000528475 GH1P01241 217 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 MMP8P22894 467 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 BACE1P56817 501 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 ZNF268Q14587 947 aaPredicted RBP24.77■■□□□ 1.56
GSDMD-208ENST00000528475 P3H1Q32P28 736 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 UBR7Q8N806 425 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 C9orf72Q96LT7 481 aa24.77■■□□□ 1.56
GSDMD-208ENST00000528475 DHX33Q9H6R0 707 aaKnown RBP24.77■■□□□ 1.56
GSDMD-208ENST00000528475 UBN1Q9NPG3 1134 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms