RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 RNPEPQ9H4A4 650 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 MYH16Q9H6N6 1097 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 DDX20Q9UHI6 824 aaKnown RBP7.32□□□□□ -1.24
PCF11-202ENST00000528336 CDYLQ9Y232 598 aa7.32□□□□□ -1.24
PCF11-202ENST00000528336 MTO1Q9Y2Z2 717 aaKnown RBP7.32□□□□□ -1.24
PCF11-202ENST00000528336 PRSS29PA6NIE9 313 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 ERC2O15083 957 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 ERN1O75460 977 aaKnown RBP7.31□□□□□ -1.24
PCF11-202ENST00000528336 TUSC2O75896 110 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 GPANK1O95872 356 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 LAG3P18627 525 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 IL12RB1P42701 662 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 OCA2Q04671 838 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 RESTQ13127 1097 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 TIGD2Q4W5G0 525 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 CCDC181Q5TID7 509 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 FNDC7Q5VTL7 733 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.31□□□□□ -1.24
PCF11-202ENST00000528336 EXOC8Q8IYI6 725 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 SYNE4Q8N205 404 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 HAS1Q92839 578 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 NT5C1BQ96P26 610 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 PNKPQ96T60 521 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 MMRN2Q9H8L6 949 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 C1orf112Q9NSG2 853 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 SLC52A1Q9NWF4 448 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 GPRC5BQ9NZH0 403 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 CFAP97Q9P2B7 532 aa7.31□□□□□ -1.24
PCF11-202ENST00000528336 GAGE12BA1L429 117 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 GAGE12HA6NDE8 117 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 ZNF785A8K8V0 405 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 TPD52L2O43399 206 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 PEX11BO96011 259 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 HLA-DOAP06340 250 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 ELANEP08246 267 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 GRM3Q14832 879 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 KHDC1LQ5JSQ8 128 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 LRRC55Q6ZSA7 311 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 TMEM132CQ8N3T6 1108 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 CELF5Q8N6W0 485 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 PCSK9Q8NBP7 692 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 NSUN7Q8NE18 718 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 CPEB3Q8NE35 698 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 BRIX1Q8TDN6 353 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 ZNF483Q8TF39 744 aaPredicted RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 SARS2Q9NP81 518 aaKnown RBP7.3□□□□□ -1.24
PCF11-202ENST00000528336 HSFX1Q9UBD0 423 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 NOX1Q9Y5S8 564 aa7.3□□□□□ -1.24
PCF11-202ENST00000528336 A0A088AWK7 358 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 UNC119BA6NIH7 251 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 LPXNO60711 386 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 MATN4O95460 622 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 CFIP05156 583 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 HDCP19113 662 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 RAB1AP62820 205 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
PCF11-202ENST00000528336 FGL2Q14314 439 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 BEAN1Q3B7T3 259 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 SPDYE7PQ495Y7 208 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 NPNTQ6UXI9 565 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 PDPRQ8NCN5 879 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 RNF31Q96EP0 1072 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 MYEOVQ96EZ4 313 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 B3GNT5Q9BYG0 378 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 OBP2AQ9NY56 170 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 RNF181Q9P0P0 153 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 FZD1Q9UP38 647 aa7.29□□□□□ -1.24
PCF11-202ENST00000528336 FRMPD2Q68DX3 1309 aaPredicted RBP7.28□□□□□ -1.24
PCF11-202ENST00000528336 ZNF202O95125 648 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 ANXA1P04083 346 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 DDX6P26196 483 aaKnown RBP eCLIP7.28□□□□□ -1.24
PCF11-202ENST00000528336 PTGS2P35354 604 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 ZNF135P52742 658 aaPredicted RBP7.28□□□□□ -1.24
PCF11-202ENST00000528336 MXRA7P84157 204 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 KIF22Q14807 665 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 B3GNTL1Q67FW5 361 aaPredicted RBP7.28□□□□□ -1.24
PCF11-202ENST00000528336 CRIP3Q6Q6R5 217 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 COL23A1Q86Y22 540 aaPredicted RBP7.28□□□□□ -1.24
PCF11-202ENST00000528336 ALOXE3Q9BYJ1 711 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 RSAD1Q9HA92 442 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 CNNM1Q9NRU3 951 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.28□□□□□ -1.24
PCF11-202ENST00000528336 ANKFY1Q9P2R3 1169 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 HS3ST3A1Q9Y663 406 aa7.28□□□□□ -1.24
PCF11-202ENST00000528336 A6NNZ2 444 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 E9PLN8 166 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 NARSO43776 548 aaKnown RBP7.27□□□□□ -1.25
PCF11-202ENST00000528336 RARBP10826 455 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 C6P13671 934 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 TACR2P21452 398 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 KCNJ5P48544 419 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 SOX8P57073 446 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 CXADRP78310 365 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 ZNF844Q08AG5 666 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 ANO6Q4KMQ2 910 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 CRB2Q5IJ48 1285 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 PPP4R4Q6NUP7 873 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 MRGPREQ86SM8 312 aa7.27□□□□□ -1.25
PCF11-202ENST00000528336 PDSS2Q86YH6 399 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms