RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PAGE5Q96GU1 130 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 CBWD1Q9BRT8 395 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 FAM213AQ9BRX8 229 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 BLZF1Q9H2G9 400 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 KIAA1586Q9HCI6 787 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 DPP3Q9NY33 737 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 FBXL5Q9UKA1 691 aa13.12□□□□□ -0.31
TRAPPC4-209ENST00000528230 DOCK8Q8NF50 2099 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 XYLBO75191 536 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 ATF2P15336 505 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 SYKP43405 635 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 GUCY2FP51841 1108 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 ROR1Q01973 937 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 YWHAHQ04917 246 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 PSMD2Q13200 908 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 SURF1Q15526 300 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 BMT2Q1RMZ1 405 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 GLIS3Q8NEA6 775 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 SAAL1Q96ER3 474 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 RBAKQ9NYW8 714 aaPredicted RBP13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 CGNQ9P2M7 1197 aaKnown RBP13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 CLUHO75153 1309 aa13.11□□□□□ -0.31
TRAPPC4-209ENST00000528230 WDR27A2RRH5 827 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF233A6NK53 670 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 TGFB1I1O43294 461 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 KLRC4O43908 158 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 SP100P23497 879 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 CASP1P29466 404 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 ELF1P32519 619 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 BMP8AQ7Z5Y6 402 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 USP37Q86T82 979 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 EFCAB13Q8IY85 973 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 TCEAL8Q8IYN2 117 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 UBALD2Q8IYN6 164 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 TMEM130Q8N3G9 435 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZSWIM2Q8NEG5 633 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 SLC7A14Q8TBB6 771 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 SCFD1Q8WVM8 642 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 SENP8Q96LD8 212 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 PCIF1Q9H4Z3 704 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 LIMD1Q9UGP4 676 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 DSEQ9UL01 958 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 SORCS3Q9UPU3 1222 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZFP37Q9Y6Q3 630 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 NOTCH4Q99466 2003 aa13.1□□□□□ -0.31
TRAPPC4-209ENST00000528230 GOLGA8IPA6NC78 632 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 OR6C75A6NL08 312 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 GOLGA8JA6NMD2 632 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 PPEF2O14830 753 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 TECTAO75443 2155 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 CYP11A1P05108 521 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 ODC1P11926 461 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 PNPLA4P41247 253 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 TAF6P49848 677 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 NDUFA8P51970 172 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 SIGLEC14Q08ET2 396 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 MYBPC2Q14324 1141 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 TRIM67Q6ZTA4 783 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 HS2ST1Q7LGA3 356 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 C12orf56Q8IXR9 622 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 GRAMD1CQ8IYS0 662 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 NXPE3Q969Y0 559 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 BORCS6Q96GS4 357 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZNF560Q96MR9 790 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 SLC39A2Q9NP94 309 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 AGPAT3Q9NRZ7 376 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 HSPBP1Q9NZL4 362 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 IGSF9Q9P2J2 1179 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 EPS15L1Q9UBC2 864 aa13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 AFF4Q9UHB7 1163 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-209ENST00000528230 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 FAM86C2PA6NEL3 165 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 PRRG1O14668 218 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 SPTLC1O15269 473 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 CCL16O15467 120 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 FSHRP23945 695 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 GBP2P32456 591 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 ARPP19P56211 112 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 WNT7BP56706 349 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 TFAMQ00059 246 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 GPR17Q13304 367 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 MTMR3Q13615 1198 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 KNOP1Q1ED39 458 aaKnown RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 SV2CQ496J9 727 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 KMT5BQ4FZB7 885 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 OVOS1Q6IE37 1185 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 GRASPQ7Z6J2 395 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 FSIP1Q8NA03 581 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 GOLGA5Q8TBA6 731 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 TMEM174Q8WUU8 243 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 PDE11AQ9HCR9 933 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 AVENQ9NQS1 362 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 EXOC1Q9NV70 894 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 ITGA11Q9UKX5 1188 aa13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 TIMM13Q9Y5L4 95 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC4-209ENST00000528230 TSC2P49815 1807 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 TMEM221A6NGB7 291 aa13.07□□□□□ -0.32
TRAPPC4-209ENST00000528230 KPNA7A9QM74 516 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms