RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TMEM132BQ14DG7 1078 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MLC1Q15049 377 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 POSTNQ15063 836 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 STX1AQ16623 288 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 DUOXA2Q1HG44 320 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TMEM266Q2M3C6 531 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 DPCR1Q3MIW9 517 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 PPP4R3AQ6IN85 833 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 ZCCHC8Q6NZY4 707 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 RNF207Q6ZRF8 634 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 UBE2R2Q712K3 238 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 CABP7Q86V35 215 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 CEP57L1Q8IYX8 460 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 DTWD1Q8N5C7 304 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TMEM145Q8NBT3 493 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 OR2W6PQ8NHA6 318 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 SYTL5Q8TDW5 730 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 LENG9Q96B70 501 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 PAGE5Q96GU1 130 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 SCYL1Q96KG9 808 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 CCDC140Q96MF4 163 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 KREMEN1Q96MU8 473 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MBOAT7Q96N66 472 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MTMR9Q96QG7 549 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TAAR1Q96RJ0 339 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 PAGR1Q9BTK6 254 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 MMTAG2Q9BU76 263 aaKnown RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 ASCC2Q9H1I8 757 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 BLZF1Q9H2G9 400 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 R3HDMLQ9H3Y0 253 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TTC12Q9H892 705 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 SUGCTQ9HAC7 445 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 GBA2Q9HCG7 927 aaPredicted RBP4.61□□□□□ -1.67
CD44-226ENST00000527889 CHST12Q9NRB3 414 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 ADAMTS5Q9UNA0 930 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 TRAF6Q9Y4K3 522 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 SPEF1Q9Y4P9 236 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 PCDHA5Q9Y5H7 936 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 FHOD1Q9Y613 1164 aa4.61□□□□□ -1.67
CD44-226ENST00000527889 SCN1AP35498 2009 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 IGLV3-22A0A075B6J6 115 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CYP3A7-CYP3A51PA0A087WV96 503 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 DDX39AO00148 427 aaKnown RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 CXCL11O14625 94 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MSTNO14793 375 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MSH4O15457 936 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 RFPL1O75677 317 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CNMDO75829 334 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 LRIG2O94898 1065 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 FBXO21O94952 628 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SNRPB2P08579 225 aaKnown RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 CYP3A4P08684 503 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 ARP10275 920 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MYCLP12524 364 aaPredicted RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 CYP3A7P24462 503 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CIITAP33076 1130 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 KCNJ6P48051 423 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 HERVK_113P62684 666 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SOX4Q06945 474 aaPredicted RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 GRM1Q13255 1194 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CUL4BQ13620 913 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 BAATQ14032 418 aaPredicted RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 MBTPS1Q14703 1052 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 PRSS53Q2L4Q9 553 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 Q4G0T1 1027 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 TMEM119Q4V9L6 283 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SYCP2LQ5T4T6 812 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 PIK3R6Q5UE93 754 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 RRAGBQ5VZM2 374 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MCTP2Q6DN12 878 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 NCAPH2Q6IBW4 605 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 DENND5AQ6IQ26 1287 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 ABHD17CQ6PCB6 329 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MOXD1Q6UVY6 613 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 C11orf96Q7Z7L8 435 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 LUZP1Q86V48 1076 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 PLA2G4DQ86XP0 818 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 KIF18BQ86Y91 864 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SAMD3Q8N6K7 520 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 IGSF22Q8N9C0 903 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 MFSD2AQ8NA29 543 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 IQUBQ8NA54 791 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SMG8Q8ND04 991 aaKnown RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 ETNPPLQ8TBG4 499 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CALML4Q96GE6 196 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CDK5RAP3Q96JB5 506 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 RMDN3Q96TC7 470 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 SENP7Q9BQF6 1050 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 TEX13BQ9BXU2 312 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 RHOBTB2Q9BYZ6 727 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 CCSER1Q9C0I3 900 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 NOL6Q9H6R4 1146 aaKnown RBP4.6□□□□□ -1.67
CD44-226ENST00000527889 ACAD9Q9H845 621 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 TXNRD2Q9NNW7 524 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 KCNMB3Q9NPA1 279 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 ANO10Q9NW15 660 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 HOXC10Q9NYD6 342 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 BTBD7Q9P203 1132 aa4.6□□□□□ -1.67
CD44-226ENST00000527889 LRWD1Q9UFC0 647 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms