RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 GOLGA8JA6NMD2 632 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 ABLIM3O94929 683 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 OAZ2O95190 189 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 NDUFA8P51970 172 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 YWHAHQ04917 246 aaPredicted RBP28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 EDAQ92838 391 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 OXCT2Q9BYC2 517 aaPredicted RBP28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 SLC39A2Q9NP94 309 aa28.53■■■□□ 2.16
TSPAN4-217ENST00000527644 CLUHO75153 1309 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 KLRC4O43908 158 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 TYMPP19971 482 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 SNRPFP62306 86 aaKnown RBP28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 SLC7A14Q8TBB6 771 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 NOC3LQ8WTT2 800 aaKnown RBP28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 LRFN3Q9BTN0 628 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 GDPD2Q9HCC8 539 aa28.52■■■□□ 2.16
TSPAN4-217ENST00000527644 ARHGEF37A1IGU5 675 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 WDR27A2RRH5 827 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 TGFB1I1O43294 461 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 XYLBO75191 536 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 POU2F2P09086 479 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 ARPP19P56211 112 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 PTPN21Q16825 1174 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 BMT2Q1RMZ1 405 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 TPGS2Q68CL5 300 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 USP37Q86T82 979 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 FSIP1Q8NA03 581 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 CACTINQ8WUQ7 758 aaKnown RBP28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 SENP8Q96LD8 212 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 KIAA1586Q9HCI6 787 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 HSPBP1Q9NZL4 362 aa28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 TIMM13Q9Y5L4 95 aaPredicted RBP28.51■■■□□ 2.15
TSPAN4-217ENST00000527644 FAM86C2PA6NEL3 165 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 ZNF233A6NK53 670 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 SPTLC1O15269 473 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 ATF2P15336 505 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 ELF1P32519 619 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 WNT7BP56706 349 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 ZXDAP98168 799 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 TFAMQ00059 246 aaKnown RBP28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 PSMD2Q13200 908 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 NELFCDQ8IXH7 590 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 AGPAT3Q9NRZ7 376 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 EXOC1Q9NV70 894 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 LIMD1Q9UGP4 676 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 MAFFQ9ULX9 164 aa28.5■■■□□ 2.15
TSPAN4-217ENST00000527644 TULP1O00294 542 aaPredicted RBP28.49■■■□□ 2.15
TSPAN4-217ENST00000527644 ODC1P11926 461 aa28.49■■■□□ 2.15
TSPAN4-217ENST00000527644 TAF6P49848 677 aa28.49■■■□□ 2.15
TSPAN4-217ENST00000527644 HS2ST1Q7LGA3 356 aa28.49■■■□□ 2.15
TSPAN4-217ENST00000527644 CGNQ9P2M7 1197 aaKnown RBP28.49■■■□□ 2.15
TSPAN4-217ENST00000527644 PRR33A8MZF0 331 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 CCL16O15467 120 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 KNOP1Q1ED39 458 aaKnown RBP28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 KMT5BQ4FZB7 885 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 OVOS1Q6IE37 1185 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 TCEAL8Q8IYN2 117 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 GOLPH3LQ9H4A5 285 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 PDE11AQ9HCR9 933 aa28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 AFF4Q9UHB7 1163 aaKnown RBP28.48■■■□□ 2.15
TSPAN4-217ENST00000527644 OR6C75A6NL08 312 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 PNPLA4P41247 253 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 STK4Q13043 487 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 SURF1Q15526 300 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 GRASPQ7Z6J2 395 aaPredicted RBP28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 CBWD2Q8IUF1 395 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 ZNF560Q96MR9 790 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.47■■■□□ 2.154e-7■■■■■ 28.1
TSPAN4-217ENST00000527644 DSEQ9UL01 958 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 POLIQ9UNA4 740 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 SORCS3Q9UPU3 1222 aa28.47■■■□□ 2.15
TSPAN4-217ENST00000527644 PRRG1O14668 218 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 N4BP1O75113 896 aaKnown RBP28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 CYP11A1P05108 521 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 CPB1P15086 417 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 GBP2P32456 591 aaPredicted RBP28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 SV2CQ496J9 727 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 KRBA2Q6ZNG9 492 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 CYP4F11Q9HBI6 524 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 ITGA11Q9UKX5 1188 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 SCN1AP35498 2009 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 MYO10Q9HD67 2058 aa28.46■■■□□ 2.15
TSPAN4-217ENST00000527644 CLIC2O15247 247 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 ZNF202O95125 648 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 TRIM67Q6ZTA4 783 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 C12orf56Q8IXR9 622 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 C1orf127Q8N9H9 656 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 XXYLT1Q8NBI6 393 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 KIAA0895Q8NCT3 520 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 GOLGA5Q8TBA6 731 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 BORCS6Q96GS4 357 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 EPS15L1Q9UBC2 864 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 AGAP1Q9UPQ3 857 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 TRIOO75962 3097 aa28.45■■■□□ 2.14
TSPAN4-217ENST00000527644 GOLGA6L4A6NEF3 574 aa28.44■■■□□ 2.14
TSPAN4-217ENST00000527644 KPNA7A9QM74 516 aa28.44■■■□□ 2.14
TSPAN4-217ENST00000527644 CYB561D2O14569 222 aa28.44■■■□□ 2.14
TSPAN4-217ENST00000527644 SEC24AO95486 1093 aa28.44■■■□□ 2.14
TSPAN4-217ENST00000527644 LRG1P02750 347 aa28.44■■■□□ 2.14
TSPAN4-217ENST00000527644 RPN1P04843 607 aaKnown RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms