RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 RBM41Q96IZ5 413 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 GLIS2Q9BZE0 524 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 DCTPP1Q9H773 170 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 GALNT8Q9NY28 637 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SYNGAP1Q96PV0 1343 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 GNB5O14775 395 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 IKBKBO14920 756 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 LSM1O15116 133 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 NPM3O75607 178 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PPP1R37O75864 691 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SCGNO76038 276 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CFBP00751 764 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 RARBP10826 455 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ABCD1P33897 745 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PSMC2P35998 433 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 GJA8P48165 433 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ERFP50548 548 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CSE1LP55060 971 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ZBED6P86452 979 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SCRN3Q0VDG4 424 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 FBXO42Q6P3S6 717 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ABRAXAS1Q6UWZ7 409 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ZBED8Q8IZ13 594 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 DPP10Q8N608 796 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 L3MBTL3Q96JM7 780 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 RBBP8Q99708 897 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 THTPAQ9BU02 230 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PAIP1Q9H074 479 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SLC39A2Q9NP94 309 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 KLHL8Q9P2G9 620 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CTNNAL1Q9UBT7 734 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 KCNJ14Q9UNX9 436 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PCDHA13Q9Y5I0 950 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ATP8B3O60423 1300 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ECDO95905 644 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ANXA1P04083 346 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 TYK2P29597 1187 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 KRT20P35900 424 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SLC16A1P53985 500 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 TUBA3CQ13748 450 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 LRRC14Q15048 493 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 MB21D1Q8N884 522 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FAM172AQ8WUF8 416 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 DHTKD1Q96HY7 919 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FSD1LQ9BXM9 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FAM192AQ9GZU8 254 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SAGE1Q9NXZ1 904 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 LCMT1Q9UIC8 334 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 GTF2A1LQ9UNN4 478 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ABCC6O95255 1503 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 F8VZ95 297 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FARP2O94887 1054 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 NDUFA10O95299 355 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 PRLP01236 227 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF18P17022 549 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CRKP46108 304 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 STARP49675 285 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ADARP55265 1226 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 C21orf59P57076 290 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 OTUD4Q01804 1114 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 PEG10Q86TG7 708 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 IFNEQ86WN2 208 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 GJA10Q969M2 543 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 NMD3Q96D46 503 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 PACSIN1Q9BY11 444 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CHMP1AQ9HD42 196 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 RPRD1BQ9NQG5 326 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CYP26B1Q9NR63 512 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 COMMD9Q9P000 198 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 PI4KBQ9UBF8 816 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP15Q9Y4E8 981 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ZHX2Q9Y6X8 837 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ARHGEF37A1IGU5 675 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CLPTM1O96005 669 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ZBTB48P10074 688 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 FOSL1P15407 271 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 EIF4A3P38919 411 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 MAGEA10P43363 369 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 C1DQ13901 141 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CERKLQ49MI3 558 aaPredicted RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 GATAD2AQ86YP4 633 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CROCCP3Q8IVE0 287 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 ABI1Q8IZP0 508 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 TBC1D19Q8N5T2 526 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 EXD1Q8NHP7 514 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SCFD1Q8WVM8 642 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CARD14Q9BXL6 1004 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CCDC59Q9P031 241 aaKnown RBP7.57□□□□□ -1.2
CTNND1-216ENST00000527467 SNX14Q9Y5W7 946 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L15C9J2P7 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L13C9JLJ4 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L11C9JVI0 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L18D6R9N7 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L22D6RA61 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L17D6RBQ6 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L19D6RCP7 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L20D6RJB6 530 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 CAMTA2O94983 1202 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 HSD3B2P26439 372 aa7.57□□□□□ -1.2
CTNND1-216ENST00000527467 USP17L24Q0WX57 530 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms