RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 WDFY4Q6ZS81 3184 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ANO9A1A5B4 782 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 PRRG1O14668 218 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 YEATS4O95619 227 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 F13A1P00488 732 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 RHOP08100 348 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ZSCAN22P10073 491 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ABCD1P33897 745 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 CCR2P41597 374 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 LILRA4P59901 499 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ADCY1Q08828 1119 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 TMEM132DQ14C87 1099 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 PRSS36Q5K4E3 855 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 TPGS2Q68CL5 300 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ASTLQ6HA08 431 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ZNF280DQ6N043 979 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 DSTYKQ6XUX3 929 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ALYREFQ86V81 257 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 HSCBQ8IWL3 235 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 HS6ST3Q8IZP7 471 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 SIX5Q8N196 739 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 FLCNQ8NFG4 579 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 BEST2Q8NFU1 509 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 GPR152Q8TDT2 470 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 POMGNT1Q8WZA1 660 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 NXPE3Q969Y0 559 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 TCEAL4Q96EI5 215 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 SAAL1Q96ER3 474 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 BORCS6Q96GS4 357 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 SENP8Q96LD8 212 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ZNF396Q96N95 335 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ACCSQ96QU6 501 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 TMEM209Q96SK2 561 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 ASB7Q9H672 318 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 CEP72Q9P209 647 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 WNT16Q9UBV4 365 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 KCNH3Q9ULD8 1083 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 DERAQ9Y315 318 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 INSL5Q9Y5Q6 135 aa11.32□□□□□ -0.6
PRPF40B-204ENST00000527253 GOLGA8IPA6NC78 632 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 GOLGA8JA6NMD2 632 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 XPOTO43592 962 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 GALR2O43603 387 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 CUTAO60888 179 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 MOSPD3O75425 235 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 GCNT3O95395 438 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 SRFP11831 508 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 CEBPBP17676 345 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 PTPN2P17706 415 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 TYMPP19971 482 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 ELF1P32519 619 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 HOXD13P35453 343 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 PTPN5P54829 565 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 GPC5P78333 572 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 YWHAHQ04917 246 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 DHX58Q96C10 678 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 PGLYRP2Q96PD5 576 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 RTP3Q9BQQ7 232 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 CBWD1Q9BRT8 395 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 FAM213AQ9BRX8 229 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 PLA2G2FQ9BZM2 168 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 FAM86C1Q9NVL1 165 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 DPP3Q9NY33 737 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 FBXL21Q9UKT6 434 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 CA14Q9ULX7 337 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 PCDHA7Q9UN72 937 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 C2CD2Q9Y426 696 aa11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 ZFP37Q9Y6Q3 630 aaPredicted RBP11.31□□□□□ -0.6
PRPF40B-204ENST00000527253 H0Y858 1186 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 LRG1P02750 347 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CPB1P15086 417 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CASP1P29466 404 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CLCN5P51795 746 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CDR1P51861 262 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 POU5F1Q01860 360 aaKnown RBP11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 TWF1Q12792 350 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 GPR17Q13304 367 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 POSTNQ15063 836 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 OVOS1Q6IE37 1185 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 OR10T2Q8NGX3 314 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CXorf38Q8TB03 319 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 PRRX2Q99811 253 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 KXD1Q9BQD3 176 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 CORO1BQ9BR76 489 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 LRRC3Q9BY71 257 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 TRIM9Q9C026 710 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 DNAJC25Q9H1X3 360 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 TNMDQ9H2S6 317 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 MFSD1Q9H3U5 465 aa11.3□□□□□ -0.6
PRPF40B-204ENST00000527253 PCIF1Q9H4Z3 704 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms