RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.9■□□□□ 0.33e-8■■■■■ 33.8
FOXRED1-207ENST00000527004 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
FOXRED1-207ENST00000527004 LCMT1Q9UIC8 334 aa16.9■□□□□ 0.3
FOXRED1-207ENST00000527004 ANAPC7Q9UJX3 599 aa16.9■□□□□ 0.3
FOXRED1-207ENST00000527004 PCDHGC3Q9UN70 934 aa16.9■□□□□ 0.3
FOXRED1-207ENST00000527004 SCINQ9Y6U3 715 aa16.9■□□□□ 0.3
FOXRED1-207ENST00000527004 SMIM35A0A1B0GVV1 85 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 ITGA4P13612 1032 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 CARSP49589 748 aaKnown RBP16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 RWDD2BP57060 319 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 ZNF667Q5HYK9 610 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 RGMBQ6NW40 437 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 TMEM192Q8IY95 271 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 SCLT1Q96NL6 688 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 HINFPQ9BQA5 517 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 BCO2Q9BYV7 579 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 NMRK2Q9NPI5 230 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 SETD4Q9NVD3 440 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 C2CD2Q9Y426 696 aa16.89■□□□□ 0.3
FOXRED1-207ENST00000527004 MROH7Q68CQ1 1323 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 ZSWIM8A7E2V4 1837 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 MBLAC1A4D2B0 266 aaPredicted RBP16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 MMP8P22894 467 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 EIF4BP23588 611 aaKnown RBP16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 CDH5P33151 784 aaPredicted RBP16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 RGS2P41220 211 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 PTP4A2Q12974 167 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 SLC10A6Q3KNW5 377 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 DCAF4L1Q3SXM0 396 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 JADE1Q6IE81 842 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 C1orf127Q8N9H9 656 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 FAM71BQ8TC56 605 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 CASKIN2Q8WXE0 1202 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 SOCS4Q8WXH5 440 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 SEC14L1Q92503 715 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 CPB2Q96IY4 423 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 ACAP3Q96P50 834 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 GCOM2Q9BZD3 368 aaPredicted RBP16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 ADAMTS10Q9H324 1103 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 SIX4Q9UIU6 781 aa16.89■□□□□ 0.29
FOXRED1-207ENST00000527004 H3BQF6 201 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CSDE1O75534 798 aaKnown RBP16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CALB1P05937 261 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CFHP08603 1231 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 NFICP08651 508 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 PAEPP09466 180 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CD58P19256 250 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 GRM5P41594 1212 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CPT1AP50416 773 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 ZNF211Q13398 564 aaPredicted RBP16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 MAMLD1Q13495 774 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 DHX34Q14147 1143 aaKnown RBP16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 TLK2Q86UE8 772 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 IFNL1Q8IU54 200 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 MREGQ8N565 214 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 TMEM35BQ8NCS4 154 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CXorf38Q8TB03 319 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 IFT81Q8WYA0 676 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 KAT2BQ92831 832 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 BTBD6Q96KE9 485 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 PPP1R16BQ96T49 567 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 C11orf70Q9BRQ4 267 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 PLEKHA5Q9HAU0 1116 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 CYP3A43Q9HB55 503 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 ST7Q9NRC1 585 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 PARVAQ9NVD7 372 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 AMACRQ9UHK6 382 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 NFU1Q9UMS0 254 aa16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
FOXRED1-207ENST00000527004 MEFVO15553 781 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 IGHA2P01877 340 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 KRT19P08727 400 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 WEE2P0C1S8 567 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 SMIM10L2AP0DMW4 78 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 SMIM10L2BP0DMW5 78 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 PYGMP11217 842 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 P4HA1P13674 534 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 CHRNA3P32297 505 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 MARCKSL1P49006 195 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 TERF2Q15554 542 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 PRAMEF19Q5SWL8 479 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 ALS2CLQ60I27 953 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 RUNDC3BQ96NL0 473 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 RAB17Q9H0T7 212 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 FLRT1Q9NZU1 646 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 FAM187AA6NFU0 413 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 ZSCAN5CA6NGD5 496 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 HAS3O00219 553 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 MED7O43513 233 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 GPR32O75388 356 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 PROSCO94903 275 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 MAN1A1P33908 653 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 TMEM132DQ14C87 1099 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 WDR72Q3MJ13 1102 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 MMS22LQ6ZRQ5 1243 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 SLC13A5Q86YT5 568 aaPredicted RBP16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 PASD1Q8IV76 773 aa16.87■□□□□ 0.29
FOXRED1-207ENST00000527004 TTC39CQ8N584 583 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms