RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 GDAP2Q9NXN4 497 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 STK39Q9UEW8 545 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 NUB1Q9Y5A7 615 aa17.77■□□□□ 0.44
CAPN1-205ENST00000526954 KPNA7A9QM74 516 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 M0QZQ0 153 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 PES1O00541 588 aaKnown RBP17.76■□□□□ 0.43
CAPN1-205ENST00000526954 TRAPPC3O43617 180 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 LRRN2O75325 713 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 FGF18O76093 207 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 EXOC3L4Q17RC7 722 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 ZNF699Q32M78 642 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 TIGD5Q53EQ6 642 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 PPP2R2DQ66LE6 453 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 SPRED2Q7Z698 418 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 DDX53Q86TM3 631 aaKnown RBP17.76■□□□□ 0.43
CAPN1-205ENST00000526954 KLHL23Q8NBE8 558 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 CCDC150Q8NCX0 1101 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 HASPINQ8TF76 798 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 TMEM169Q96HH4 297 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-205ENST00000526954 C11orf84Q9BUA3 381 aaPredicted RBP17.76■□□□□ 0.43
CAPN1-205ENST00000526954 IMPG2Q9BZV3 1241 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 LZTS1Q9Y250 596 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 VWA8A3KMH1 1905 aa17.76■□□□□ 0.43
CAPN1-205ENST00000526954 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.434e-6■■■■■ 34.5
CAPN1-205ENST00000526954 TRIOBPQ9H2D6 2365 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 TMEM265A0A087WTH1 108 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 UBASH3AP57075 661 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 NOP14P78316 857 aaKnown RBP17.75■□□□□ 0.43
CAPN1-205ENST00000526954 UBXN1Q04323 297 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 KRT17Q04695 432 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 NR1I3Q14994 352 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 WDR44Q5JSH3 913 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 FUT10Q6P4F1 479 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 SARM1Q6SZW1 724 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 LIMS2Q7Z4I7 341 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 SENP8Q96LD8 212 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 ERGIC2Q96RQ1 377 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 PI4K2AQ9BTU6 479 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 GPR62Q9BZJ7 368 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 INTS2Q9H0H0 1204 aaKnown RBP17.75■□□□□ 0.43
CAPN1-205ENST00000526954 GCNT4Q9P109 453 aa17.75■□□□□ 0.43
CAPN1-205ENST00000526954 CHD9Q3L8U1 2897 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 ARHGEF37A1IGU5 675 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 H3BNC9 293 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 SYN3O14994 580 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 FAM163BP0C2L3 166 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 PON1P27169 355 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 BRCC3P46736 316 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 UBE3AQ05086 875 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 KCNMA1Q12791 1236 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 WDR72Q3MJ13 1102 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 ZNF667Q5HYK9 610 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 TRIM65Q6PJ69 517 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 DSTYKQ6XUX3 929 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 DPH6Q7L8W6 267 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 FBXO22Q8NEZ5 403 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 CRACR2AQ9BSW2 395 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 VN1R3Q9BXE9 311 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 APOBEC3GQ9HC16 384 aaKnown RBP17.74■□□□□ 0.43
CAPN1-205ENST00000526954 IFNKQ9P0W0 207 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 PCDHB8Q9UN66 801 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 SNX9Q9Y5X1 595 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 LAMA3Q16787 3333 aa17.74■□□□□ 0.43
CAPN1-205ENST00000526954 TSC2P49815 1807 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 CYB561D2O14569 222 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 TEX33O43247 280 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SOD2P04179 222 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 CYP11A1P05108 521 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 P4HA1P13674 534 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SLC9A1P19634 815 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 TYMPP19971 482 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 FGFR3P22607 806 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SPOPLQ6IQ16 392 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 DPY19L2P1Q6NXN4 242 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.73■□□□□ 0.43
CAPN1-205ENST00000526954 TOP6BLQ8N6T0 577 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SPATA18Q8TC71 538 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SPPL3Q8TCT6 385 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 NT5C1BQ96P26 610 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 HERC2P3Q9BVR0 1158 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 PUF60Q9UHX1 559 aaKnown RBP17.73■□□□□ 0.43
CAPN1-205ENST00000526954 DSEQ9UL01 958 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 MTUS1Q9ULD2 1270 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 SIK3Q9Y2K2 1263 aa17.73■□□□□ 0.43
CAPN1-205ENST00000526954 A0A1W2PQC6 194 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 I3L4J1 428 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 ODC1P11926 461 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 TNNC1P63316 161 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 USP41Q3LFD5 358 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 FAM171A1Q5VUB5 890 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 TMEM86AQ8N2M4 240 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 TATDN2Q93075 761 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 BCO2Q9BYV7 579 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 NIF3L1Q9GZT8 377 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 FAM124BQ9H5Z6 455 aaPredicted RBP17.72■□□□□ 0.43
CAPN1-205ENST00000526954 ZNF576Q9H609 170 aa17.72■□□□□ 0.43
CAPN1-205ENST00000526954 SIX2Q9NPC8 291 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms