RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ZNF536O15090 1300 aa10.47□□□□□ -0.73
USP35-201ENST00000526425 HOXD11P31277 338 aaPredicted RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 NSFP46459 744 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 ERFP50548 548 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ATP11AP98196 1134 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 DHX9Q08211 1270 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 DYNC1I2Q13409 638 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 CCDC6Q16204 474 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ANKRD20A2Q5SQ80 823 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ANKRD20A1Q5TYW2 823 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ANKRD20A3Q5VUR7 823 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 FASTKD5Q7L8L6 764 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 FBXL13Q8NEE6 735 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 TRAPPC12Q8WVT3 735 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 NAF1Q96HR8 494 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 DDX23Q9BUQ8 820 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 OSBPL7Q9BZF2 842 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 NRBP2Q9NSY0 501 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 AGO2Q9UKV8 859 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 MTUS1Q9ULD2 1270 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 GLTPD2A6NH11 291 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 SLC26A4O43511 780 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 VIMP08670 466 aaKnown RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 FECHP22830 423 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 TUBP50607 506 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 BPIFB4P59827 614 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 LACTBP83111 547 aaPredicted RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 EMC2Q15006 297 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 LY6KQ17RY6 165 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 C6orf183Q5T699 404 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 GRAMD4Q6IC98 578 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ANO5Q75V66 913 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 MCPH1Q8NEM0 835 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 RFFLQ8WZ73 363 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 HAUS1Q96CS2 278 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 TMEM117Q9H0C3 514 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 RBAKQ9NYW8 714 aaPredicted RBP10.46□□□□□ -0.73
USP35-201ENST00000526425 PGAP2Q9UHJ9 254 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 ZNF112Q9UJU3 913 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 TSC22D4Q9Y3Q8 395 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 SLC4A7Q9Y6M7 1214 aa10.46□□□□□ -0.73
USP35-201ENST00000526425 GRIN2DO15399 1336 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 TRIM43BA6NCK2 446 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 A8MUI8 341 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 RBAK-RBAKDNI3L0D1 243 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 HSD17B4P51659 736 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 MUM1Q2TAK8 710 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 COBLL1Q53SF7 1204 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 DAB2IPQ5VWQ8 1189 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 RNF149Q8NC42 400 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 LNX1Q8TBB1 728 aaPredicted RBP10.46□□□□□ -0.74
USP35-201ENST00000526425 FBF1Q8TES7 1133 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 APOL6Q9BWW8 343 aa10.46□□□□□ -0.74
USP35-201ENST00000526425 SPDYE16A6NNV3 312 aaPredicted RBP10.45□□□□□ -0.74
USP35-201ENST00000526425 IFNB1P01574 187 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 TMEM191BP0C7N4 346 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 HNRNPH3P31942 346 aaKnown RBP10.45□□□□□ -0.74
USP35-201ENST00000526425 OAZ1P54368 228 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 GPC5P78333 572 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 PPATQ06203 517 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 ANKRD20A8PQ5CZ79 823 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 LLGL2Q6P1M3 1020 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.45□□□□□ -0.74
USP35-201ENST00000526425 ZC3H15Q8WU90 426 aaKnown RBP10.45□□□□□ -0.74
USP35-201ENST00000526425 SYN2Q92777 582 aaPredicted RBP10.45□□□□□ -0.74
USP35-201ENST00000526425 SIKE1Q9BRV8 207 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 PFDN4Q9NQP4 134 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 CYP26B1Q9NR63 512 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 RAB20Q9NX57 234 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 AKT3Q9Y243 479 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 DAAM1Q9Y4D1 1078 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 AFG3L2Q9Y4W6 797 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 UBIAD1Q9Y5Z9 338 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 SNCAIPQ9Y6H5 919 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 MYH11P35749 1972 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 CLDN3O15551 220 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 CCNFP41002 786 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 STAT5BP51692 787 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 CALCOCO2Q13137 446 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 ORC1Q13415 861 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 QSER1Q2KHR3 1735 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 C10orf76Q5T2E6 689 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 GPD1LQ8N335 351 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 SAMD3Q8N6K7 520 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 USP38Q8NB14 1042 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 ZNF564Q8TBZ8 553 aaPredicted RBP10.45□□□□□ -0.74
USP35-201ENST00000526425 C1orf54Q8WWF1 131 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 BSNDQ8WZ55 320 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 PBKQ96KB5 322 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 ALG6Q9Y672 507 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 AGPSO00116 658 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 PIK3R2O00459 728 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 DGAT1O75907 488 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 FSTL1Q12841 308 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 SNAPC2Q13487 334 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 BLMHQ13867 455 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 Q3C1V9 767 aa10.45□□□□□ -0.74
USP35-201ENST00000526425 TREML2Q5T2D2 321 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms