RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ADALQ6DHV7 355 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 SV2BQ7L1I2 683 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 EFCAB13Q8IY85 973 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 TCEAL8Q8IYN2 117 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 TTC9BQ8N6N2 239 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 LINC00301Q8NCQ3 95 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 HPS3Q969F9 1004 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 SAAL1Q96ER3 474 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 CORO1BQ9BR76 489 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 MRPL44Q9H9J2 332 aaKnown RBP13.09□□□□□ -0.31
SSBP3-210ENST00000525990 CEP72Q9P209 647 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 AGO2Q9UKV8 859 aaKnown RBP13.09□□□□□ -0.31
SSBP3-210ENST00000525990 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 LRRN2O75325 713 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 GCNT3O95395 438 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 POU2F2P09086 479 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 IDEP14735 1019 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 GJA1P17302 382 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 CYP3A5P20815 502 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 ELF1P32519 619 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 STAT6P42226 847 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 CLCN5P51795 746 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 YWHAHQ04917 246 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-210ENST00000525990 TWF1Q12792 350 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 TMEM132DQ14C87 1099 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 STK38Q15208 465 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 PRSS36Q5K4E3 855 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 C9orf57Q5W0N0 161 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 DSTYKQ6XUX3 929 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 SPRYD3Q8NCJ5 442 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 ATOH1Q92858 354 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-210ENST00000525990 PRRX2Q99811 253 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 FOXQ1Q9C009 403 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 ZSCAN16Q9H4T2 348 aaPredicted RBP13.08□□□□□ -0.32
SSBP3-210ENST00000525990 TBC1D17Q9HA65 648 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 ARHGEF3Q9NR81 526 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 WNT16Q9UBV4 365 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 MRPS23Q9Y3D9 190 aaKnown RBP13.08□□□□□ -0.32
SSBP3-210ENST00000525990 NCANO14594 1321 aa13.08□□□□□ -0.32
SSBP3-210ENST00000525990 FANCMQ8IYD8 2048 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 ANO9A1A5B4 782 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 GOLGA8IPA6NC78 632 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 GOLGA8JA6NMD2 632 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
SSBP3-210ENST00000525990 STK25O00506 426 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 PIRO00625 290 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 MOSPD3O75425 235 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 SOAT2O75908 522 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 OAZ2O95190 189 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 DCNP07585 359 aaKnown RBP13.07□□□□□ -0.32
SSBP3-210ENST00000525990 PTPN2P17706 415 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 FCARP24071 287 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 TXLNAP40222 546 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 LILRA4P59901 499 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 E2F4Q16254 413 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
SSBP3-210ENST00000525990 APPL2Q8NEU8 664 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 BEST2Q8NFU1 509 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 OR10T2Q8NGX3 314 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 NXPE3Q969Y0 559 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 SENP8Q96LD8 212 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 SLC2A4RGQ9NR83 387 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 AFF4Q9UHB7 1163 aaKnown RBP13.07□□□□□ -0.32
SSBP3-210ENST00000525990 YIPF1Q9Y548 306 aa13.07□□□□□ -0.32
SSBP3-210ENST00000525990 ZNF638Q14966 1978 aaKnown RBP13.07□□□□□ -0.32
SSBP3-210ENST00000525990 FRMD3A2A2Y4 597 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SPTLC2O15270 562 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
SSBP3-210ENST00000525990 GLULP15104 373 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CD72P21854 359 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SCP2P22307 547 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CASP1P29466 404 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 DUSP4Q13115 394 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SNW1Q13573 536 aaKnown RBP13.06□□□□□ -0.32
SSBP3-210ENST00000525990 KYAT1Q16773 422 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 TPGS2Q68CL5 300 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 TANGO2Q6ICL3 276 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 OVOS1Q6IE37 1185 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SHC4Q6S5L8 630 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CCDC73Q6ZRK6 1079 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 ATAD1Q8NBU5 361 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SNX21Q969T3 373 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 HVCN1Q96D96 273 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 RTP3Q9BQQ7 232 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 CBWD1Q9BRT8 395 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 FAM213AQ9BRX8 229 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 DNAJC25Q9H1X3 360 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 PCIF1Q9H4Z3 704 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 PANK4Q9NVE7 773 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 SLC27A5Q9Y2P5 690 aa13.06□□□□□ -0.32
SSBP3-210ENST00000525990 ZFP37Q9Y6Q3 630 aaPredicted RBP13.06□□□□□ -0.32
SSBP3-210ENST00000525990 MORC2Q9Y6X9 1032 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms