RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 POU2F2P09086 479 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 ODC1P11926 461 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 TYMPP19971 482 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 CASP1P29466 404 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 ARPP19P56211 112 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 LILRA4P59901 499 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 SNRPFP62306 86 aaKnown RBP18.96■□□□□ 0.63
NR1H3-228ENST00000525441 ZXDAP98168 799 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 EHHADHQ08426 723 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 TPGS2Q68CL5 300 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 HS2ST1Q7LGA3 356 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 GRAMD1CQ8IYS0 662 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 TMEM130Q8N3G9 435 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 KIAA1586Q9HCI6 787 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 C11orf16Q9NQ32 467 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 MAFFQ9ULX9 164 aa18.96■□□□□ 0.63
NR1H3-228ENST00000525441 FAM237AA0A1B0GTK4 181 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 ANO9A1A5B4 782 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 PPEF2O14830 753 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 ABLIM3O94929 683 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 OAZ2O95190 189 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 TFAMQ00059 246 aaKnown RBP18.95■□□□□ 0.62
NR1H3-228ENST00000525441 EFCAB13Q8IY85 973 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 FSIP1Q8NA03 581 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 SENP8Q96LD8 212 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 EXOC1Q9NV70 894 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 LIMD1Q9UGP4 676 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 POLIQ9UNA4 740 aa18.95■□□□□ 0.62
NR1H3-228ENST00000525441 C2orf16Q68DN1 1984 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 WDR27A2RRH5 827 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 ZNF233A6NK53 670 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 OR6C75A6NL08 312 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 PRRG1O14668 218 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 CCL16O15467 120 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 CPB1P15086 417 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 ATF2P15336 505 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 GBP2P32456 591 aaPredicted RBP18.94■□□□□ 0.62
NR1H3-228ENST00000525441 PNPLA4P41247 253 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 TAF6P49848 677 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 MTMR3Q13615 1198 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 SURF1Q15526 300 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 NELFCDQ8IXH7 590 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 ZSWIM2Q8NEG5 633 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 SCFD1Q8WVM8 642 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 CCDC47Q96A33 483 aaKnown RBP18.94■□□□□ 0.62
NR1H3-228ENST00000525441 CCDC34Q96HJ3 373 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 ZNF560Q96MR9 790 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 SLC39A2Q9NP94 309 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.94■□□□□ 0.62
NR1H3-228ENST00000525441 HSPBP1Q9NZL4 362 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 CGNQ9P2M7 1197 aaKnown RBP18.94■□□□□ 0.62
NR1H3-228ENST00000525441 DSEQ9UL01 958 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 SORCS3Q9UPU3 1222 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 TIMM13Q9Y5L4 95 aaPredicted RBP18.94■□□□□ 0.62
NR1H3-228ENST00000525441 DENND4AQ7Z401 1863 aa18.94■□□□□ 0.62
NR1H3-228ENST00000525441 LRG1P02750 347 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 FSHRP23945 695 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 HOXD13P35453 343 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 NDUFA8P51970 172 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 PSMD2Q13200 908 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 BMT2Q1RMZ1 405 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 SV2CQ496J9 727 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 OVOS1Q6IE37 1185 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 TRIM67Q6ZTA4 783 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 METTL23Q86XA0 190 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 TCEAL8Q8IYN2 117 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 UBALD2Q8IYN6 164 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 CYP4F11Q9HBI6 524 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 AGPAT3Q9NRZ7 376 aa18.93■□□□□ 0.62
NR1H3-228ENST00000525441 AFF4Q9UHB7 1163 aaKnown RBP18.93■□□□□ 0.62
NR1H3-228ENST00000525441 ANK1P16157 1881 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 SPTLC1O15269 473 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 KLRC4O43908 158 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 SIGLEC14Q08ET2 396 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 KNOP1Q1ED39 458 aaKnown RBP18.92■□□□□ 0.62
NR1H3-228ENST00000525441 GET4Q7L5D6 327 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-228ENST00000525441 GRASPQ7Z6J2 395 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-228ENST00000525441 GOLGA5Q8TBA6 731 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 GDPD2Q9HCC8 539 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 PDE11AQ9HCR9 933 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 EPS15L1Q9UBC2 864 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 ITGA11Q9UKX5 1188 aa18.92■□□□□ 0.62
NR1H3-228ENST00000525441 R3HCC1Q9Y3T6 440 aaKnown RBP18.92■□□□□ 0.62
NR1H3-228ENST00000525441 ZFP37Q9Y6Q3 630 aaPredicted RBP18.92■□□□□ 0.62
NR1H3-228ENST00000525441 GOLGA6L4A6NEF3 574 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 CYB561D2O14569 222 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 TGFB1I1O43294 461 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 CYP11A1P05108 521 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 ASGR2P07307 311 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 TMEM191BP0C7N4 346 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 COL9A1P20849 921 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 WNT7BP56706 349 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 MYBPC2Q14324 1141 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 KMT5BQ4FZB7 885 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 CBWD2Q8IUF1 395 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 ANKRD36BP1Q96IX9 119 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 MYADMQ96S97 322 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 IGSF9Q9P2J2 1179 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 AGAP1Q9UPQ3 857 aa18.91■□□□□ 0.62
NR1H3-228ENST00000525441 TCHHQ07283 1943 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms