RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 AASDHPPTQ9NRN7 309 aa5.27□□□□□ -1.57
CD44-217ENST00000525348 TYW1Q9NV66 732 aaKnown RBP5.27□□□□□ -1.57
CD44-217ENST00000525348 MRPS18AQ9NVS2 196 aaKnown RBP5.27□□□□□ -1.57
CD44-217ENST00000525348 TESQ9UGI8 421 aaKnown RBP5.27□□□□□ -1.57
CD44-217ENST00000525348 IP6K2Q9UHH9 426 aa5.27□□□□□ -1.57
CD44-217ENST00000525348 MYADML2A6NDP7 307 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 ALDH1L1O75891 902 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 PDGFRBP09619 1106 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 CLK3P49761 638 aaKnown RBP5.26□□□□□ -1.57
CD44-217ENST00000525348 MAP2K6P52564 334 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 ANAPC15P60006 121 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 TTF1Q15361 905 aaPredicted RBP5.26□□□□□ -1.57
CD44-217ENST00000525348 CCDC93Q567U6 631 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 OLFML1Q6UWY5 402 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 FAM90A1Q86YD7 464 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 CFAP52Q8N1V2 620 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 C3orf20Q8ND61 904 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 SLC17A8Q8NDX2 589 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 CAVIN3Q969G5 261 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 IMPG2Q9BZV3 1241 aa5.26□□□□□ -1.57
CD44-217ENST00000525348 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.26□□□□□ -1.57
CD44-217ENST00000525348 A0A1W2PS29 197 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 OVOL3O00110 214 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 SUN1O94901 812 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 RHOBTB3O94955 611 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 ESRRBO95718 433 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 PF4V1P10720 104 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 KCNA2P16389 499 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 BMP5P22003 454 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 PRDX5P30044 214 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 AVPR1BP47901 424 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 HK3P52790 923 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 NOGQ13253 232 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 TMPRSS9Q7Z410 1059 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 SSH3Q8TE77 659 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 TMEM125Q96AQ2 219 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 RGMAQ96B86 450 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 RTFDC1Q9BY42 306 aaPredicted RBP5.25□□□□□ -1.57
CD44-217ENST00000525348 RHOBTB2Q9BYZ6 727 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 AGAP1Q9UPQ3 857 aa5.25□□□□□ -1.57
CD44-217ENST00000525348 MGST3O14880 152 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 MATN4O95460 622 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 RPLP2P05387 115 aaKnown RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 LPOP22079 712 aaPredicted RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 GATA3P23771 443 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 PHKA1P46020 1223 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 NANOS3P60323 173 aaKnown RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 PSMC1P62191 440 aaKnown RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 IGBP1P78318 339 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 BLOC1S1P78537 153 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 MPP3Q13368 585 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 CD300EQ496F6 205 aaPredicted RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 TAPT1Q6NXT6 567 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 Q6ZNX1 250 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 HEATR3Q7Z4Q2 680 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 LNX2Q8N448 690 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 FBXO41Q8TF61 875 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 ZG16BQ96DA0 208 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 PTCD3Q96EY7 689 aaKnown RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 CASS4Q9NQ75 786 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 TBCCD1Q9NVR7 557 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 SIDT1Q9NXL6 827 aaKnown RBP5.24□□□□□ -1.57
CD44-217ENST00000525348 KCTD5Q9NXV2 234 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 ABCF2Q9UG63 623 aa5.24□□□□□ -1.57
CD44-217ENST00000525348 TRGV11A0A075B6L2 103 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 PRAMEF33A0A0G2JMD5 474 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 CCDC195A0A1B0GUA6 201 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 ZNF785A8K8V0 405 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 KIAA0355O15063 1070 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 AKAP10O43572 662 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 PRAMEF10O60809 474 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 DTNBO60941 627 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 FTLP02792 175 aaPredicted RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 GJB1P08034 283 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 CYP2C19P33261 490 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 PIN1Q13526 163 aaPredicted RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 ZNF267Q14586 743 aaPredicted RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 SF3B3Q15393 1217 aaKnown RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 PGS1Q32NB8 556 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 SP5Q6BEB4 398 aaPredicted RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 PPP1R3BQ86XI6 285 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 RAVER1Q8IY67 606 aaKnown RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 ADGRG5Q8IZF4 528 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 HPS3Q969F9 1004 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 MVB12AQ96EY5 273 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 AIFM2Q9BRQ8 373 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 SLC12A5Q9H2X9 1139 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 SLAMF7Q9NQ25 335 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 MAN1C1Q9NR34 630 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 ETAA1Q9NY74 926 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 POLHQ9Y253 713 aa5.23□□□□□ -1.57
CD44-217ENST00000525348 THRAP3Q9Y2W1 955 aaKnown RBP5.23□□□□□ -1.57
CD44-217ENST00000525348 SLC16A6O15403 523 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 AHSGP02765 367 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 ANXA1P04083 346 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 AKAP5P24588 427 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 SMARCA1P28370 1054 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 PIK3CGP48736 1102 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 PTH2RP49190 550 aa5.22□□□□□ -1.57
CD44-217ENST00000525348 ANXA11P50995 505 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms