RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 CLUHO75153 1309 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 TULP1O00294 542 aaPredicted RBP20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 PIRO00625 290 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 SPTLC1O15269 473 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 ARPP19P56211 112 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 LILRA4P59901 499 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 PPM1LQ5SGD2 360 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 NT5DC4Q86YG4 428 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 NELFCDQ8IXH7 590 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 SLC7A14Q8TBB6 771 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 WDR6Q9NNW5 1121 aaKnown RBP20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 AGPAT3Q9NRZ7 376 aa20.03■□□□□ 0.8
TSPAN4-215ENST00000525334 WDR27A2RRH5 827 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 KIAA0391O15091 583 aaKnown RBP20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 TGFB1I1O43294 461 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 HNRNPA1P09651 372 aaKnown RBP eCLIP20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 HOXA9P31269 272 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 ZXDAP98168 799 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 YWHAHQ04917 246 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 BMT2Q1RMZ1 405 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 EXOC1Q9NV70 894 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 HSPBP1Q9NZL4 362 aa20.02■□□□□ 0.8
TSPAN4-215ENST00000525334 CCL16O15467 120 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 ABLIM3O94929 683 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 MYL1P05976 194 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 PAX3P23760 479 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 TFAMQ00059 246 aaKnown RBP20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 PTPN21Q16825 1174 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 KMT5BQ4FZB7 885 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 OTOP3Q7RTS5 596 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 CBWD2Q8IUF1 395 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 ZDHHC14Q8IZN3 488 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 ZNF461Q8TAF7 563 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 ACSF2Q96CM8 615 aaPredicted RBP20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 SENP8Q96LD8 212 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 PDE11AQ9HCR9 933 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 TSC2P49815 1807 aa20.01■□□□□ 0.79
TSPAN4-215ENST00000525334 SCN1AP35498 2009 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 N4BP1O75113 896 aaKnown RBP20■□□□□ 0.79
TSPAN4-215ENST00000525334 OAZ2O95190 189 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 PRR29P0C7W0 189 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 ODC1P11926 461 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 TYMPP19971 482 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 STK4Q13043 487 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 UVSSAQ2YD98 709 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 KRBA2Q6ZNG9 492 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 USP37Q86T82 979 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 PLCD3Q8N3E9 789 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 KIAA0895Q8NCT3 520 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 FAM84AQ96KN4 292 aa20■□□□□ 0.79
TSPAN4-215ENST00000525334 ZNF233A6NK53 670 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 CLIC2O15247 247 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 XYLBO75191 536 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 CPB1P15086 417 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 ATF2P15336 505 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 TAF6P49848 677 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 SNRPFP62306 86 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 KNOP1Q1ED39 458 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 TPGS2Q68CL5 300 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 TRIM67Q6ZTA4 783 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 RTL10Q7L3V2 364 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 HS2ST1Q7LGA3 356 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 GRASPQ7Z6J2 395 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 C1orf127Q8N9H9 656 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 LIMD1Q9UGP4 676 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 POLIQ9UNA4 740 aa19.99■□□□□ 0.79
TSPAN4-215ENST00000525334 TECTAO75443 2155 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 PRRG1O14668 218 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 ZNF202O95125 648 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 SEC24AO95486 1093 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 RPN1P04843 607 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 ITGB3P05106 788 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 ASGR2P07307 311 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 POU2F2P09086 479 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 POLR2BP30876 1174 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 GBP2P32456 591 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 ELF1P32519 619 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 CYP2J2P51589 502 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 NTHL1P78549 312 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 PSMD2Q13200 908 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 LMBRD2Q68DH5 695 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 OVOS1Q6IE37 1185 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 GET4Q7L5D6 327 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 CACTINQ8WUQ7 758 aaKnown RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 MYADMQ96S97 322 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 OXCT2Q9BYC2 517 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 MTMR12Q9C0I1 747 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 CYP4F11Q9HBI6 524 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 KIAA1586Q9HCI6 787 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 PTPRJQ12913 1337 aa19.98■□□□□ 0.79
TSPAN4-215ENST00000525334 ARHGEF37A1IGU5 675 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 OR6C75A6NL08 312 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 CYP11A1P05108 521 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 OR4Q2P0C623 313 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 TMEM191BP0C7N4 346 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 ADCY1Q08828 1119 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 DPYDQ12882 1025 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 SNRNP35Q16560 246 aaKnown RBP19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 SV2CQ496J9 727 aa19.97■□□□□ 0.79
TSPAN4-215ENST00000525334 SCARA3Q6AZY7 606 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms