RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 KCNT2Q6UVM3 1135 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TRAPPC11Q7Z392 1133 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 OSTM1Q86WC4 334 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CREBRFQ8IUR6 639 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CMTR2Q8IYT2 770 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 GOLGA5Q8TBA6 731 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TAS1R2Q8TE23 839 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 AUTS2Q8WXX7 1259 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CLP1Q92989 425 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 KAT5Q92993 513 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 BPIFA3Q9BQP9 254 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CRACR2AQ9BSW2 395 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 XYLT2Q9H1B5 865 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 VPS16Q9H269 839 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 THAP9Q9H5L6 903 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 PLEKHA5Q9HAU0 1116 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 DPP3Q9NY33 737 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 CGNQ9P2M7 1197 aaKnown RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 AGAP1Q9UPQ3 857 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 FRMD4BQ9Y2L6 1034 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 INSL6Q9Y581 213 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 PCDHA11Q9Y5I1 949 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TIMM13Q9Y5L4 95 aaPredicted RBP7.01□□□□□ -1.29
CD44-214ENST00000525211 CUL9Q8IWT3 2517 aa7.01□□□□□ -1.29
CD44-214ENST00000525211 TDRD15B5MCY1 1934 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 PODXLO00592 558 aa7□□□□□ -1.29
CD44-214ENST00000525211 IKBKBO14920 756 aa7□□□□□ -1.29
CD44-214ENST00000525211 KIAA0391O15091 583 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 MAPK13O15264 365 aa7□□□□□ -1.29
CD44-214ENST00000525211 ADAM12O43184 909 aa7□□□□□ -1.29
CD44-214ENST00000525211 LPXNO60711 386 aa7□□□□□ -1.29
CD44-214ENST00000525211 KIF20AO95235 890 aa7□□□□□ -1.29
CD44-214ENST00000525211 IL18RAPO95256 599 aa7□□□□□ -1.29
CD44-214ENST00000525211 EPB41P11171 864 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 TNNI1P19237 187 aa7□□□□□ -1.29
CD44-214ENST00000525211 SLC9A1P19634 815 aa7□□□□□ -1.29
CD44-214ENST00000525211 RPL13P26373 211 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 LRPAP1P30533 357 aa7□□□□□ -1.29
CD44-214ENST00000525211 IRS1P35568 1242 aa7□□□□□ -1.29
CD44-214ENST00000525211 PPP1R2P41236 205 aa7□□□□□ -1.29
CD44-214ENST00000525211 RAP1GAPP47736 663 aa7□□□□□ -1.29
CD44-214ENST00000525211 COPB1P53618 953 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 YARSP54577 528 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 ERVFC1P60507 584 aa7□□□□□ -1.29
CD44-214ENST00000525211 KCNH2Q12809 1159 aa7□□□□□ -1.29
CD44-214ENST00000525211 TUSC3Q13454 348 aa7□□□□□ -1.29
CD44-214ENST00000525211 ZACNQ401N2 412 aa7□□□□□ -1.29
CD44-214ENST00000525211 CCDC40Q4G0X9 1142 aa7□□□□□ -1.29
CD44-214ENST00000525211 EPC2Q52LR7 807 aa7□□□□□ -1.29
CD44-214ENST00000525211 KIAA0319Q5VV43 1072 aa7□□□□□ -1.29
CD44-214ENST00000525211 TCERG1LQ5VWI1 586 aa7□□□□□ -1.29
CD44-214ENST00000525211 RSPO2Q6UXX9 243 aaPredicted RBP7□□□□□ -1.29
CD44-214ENST00000525211 Q7L0L9 218 aa7□□□□□ -1.29
CD44-214ENST00000525211 FRMD5Q7Z6J6 570 aa7□□□□□ -1.29
CD44-214ENST00000525211 WDR49Q8IV35 697 aa7□□□□□ -1.29
CD44-214ENST00000525211 ARHGEF19Q8IW93 802 aa7□□□□□ -1.29
CD44-214ENST00000525211 ABI1Q8IZP0 508 aa7□□□□□ -1.29
CD44-214ENST00000525211 SLC39A11Q8N1S5 342 aa7□□□□□ -1.29
CD44-214ENST00000525211 FIBCD1Q8N539 461 aa7□□□□□ -1.29
CD44-214ENST00000525211 KLHL23Q8NBE8 558 aa7□□□□□ -1.29
CD44-214ENST00000525211 FAM200AQ8TCP9 573 aa7□□□□□ -1.29
CD44-214ENST00000525211 GDPD5Q8WTR4 605 aa7□□□□□ -1.29
CD44-214ENST00000525211 POM121Q96HA1 1249 aa7□□□□□ -1.29
CD44-214ENST00000525211 FAM161BQ96MY7 647 aa7□□□□□ -1.29
CD44-214ENST00000525211 RPS6KC1Q96S38 1066 aa7□□□□□ -1.29
CD44-214ENST00000525211 TMEM209Q96SK2 561 aa7□□□□□ -1.29
CD44-214ENST00000525211 ARID3AQ99856 593 aa7□□□□□ -1.29
CD44-214ENST00000525211 RTP3Q9BQQ7 232 aa7□□□□□ -1.29
CD44-214ENST00000525211 MKNK1Q9BUB5 465 aa7□□□□□ -1.29
CD44-214ENST00000525211 GTPBP4Q9BZE4 634 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 ASB7Q9H672 318 aa7□□□□□ -1.29
CD44-214ENST00000525211 KIAA1586Q9HCI6 787 aa7□□□□□ -1.29
CD44-214ENST00000525211 ALG13Q9NP73 1137 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 SIX2Q9NPC8 291 aa7□□□□□ -1.29
CD44-214ENST00000525211 ARMCX3Q9UH62 379 aaPredicted RBP7□□□□□ -1.29
CD44-214ENST00000525211 LIMA1Q9UHB6 759 aaKnown RBP7□□□□□ -1.29
CD44-214ENST00000525211 NUB1Q9Y5A7 615 aa7□□□□□ -1.29
CD44-214ENST00000525211 ATG2AQ2TAZ0 1938 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 PLXNA4Q9HCM2 1894 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 RNF225M0QZC1 329 aaPredicted RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 FGF18O76093 207 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 RPL17P18621 184 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 TKTP29401 623 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 CTNNB1P35222 781 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 BMPR1AP36894 532 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 MTIF2P46199 727 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 FMO5P49326 533 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 AARSP49588 968 aaKnown RBP eCLIP6.99□□□□□ -1.29
CD44-214ENST00000525211 CDH8P55286 799 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 ERVK-21P61565 698 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 SMAD3P84022 425 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 FANCCQ00597 558 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 POU5F1Q01860 360 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 RNASELQ05823 741 aaKnown RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 LRMPQ12912 555 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 ORC1Q13415 861 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 ADGRE1Q14246 886 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 GRIN2CQ14957 1233 aa6.99□□□□□ -1.29
CD44-214ENST00000525211 TPD52L1Q16890 204 aaPredicted RBP6.99□□□□□ -1.29
CD44-214ENST00000525211 DUOXA2Q1HG44 320 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms